Gene CPF_2616 details

Gene Information

• Locus tag: CPF_2616
• Symbol: ispF
• ID: 4203168
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 2885638
• End bp: 2886108
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 638083483
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_697006
• Protein GI: 110799737
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.652777
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAATAG GAATGGGATA TGATGTTCAT AAATTAGTTG AAAATAGAGA TTTAATATTA 
GGTGGAGTAA AAATTCCTTA TGAAAAAGGA CTTTTAGGCC ATTCAGATGC TGATGTATTA 
TTACACGCAA TAATGGATTC ACTATTAGGA GCAGCGGCTT TAGGAGATAT AGGAAAGCAT 
TTTCCAGATA CAGACCCTAA ATACAAAGGT GCTGATAGCA TAAAACTTCT AGAATTTGTA 
GGTGAACTTT TAAATAAAAA TAACTATAAA ATATCAAATA TAGATGCAAC TATAATAGCT 
CAAAGACCAA AAATGGCTCC TCATATACCT ACTATGAGAG AAAATATAGC TAAAGCATTA 
AATATAGACT TAGATCAAAT AAATGTTAAA GCAACTACTG AGGAAGGACT TGGTTTTACT 
GGTTCTGGAG AAGGAATCTC ATCTCAAAGT ATTTGTCTTT TAGTAAAATA A 

 

Protein sequence

MRIGMGYDVH KLVENRDLIL GGVKIPYEKG LLGHSDADVL LHAIMDSLLG AAALGDIGKH 
FPDTDPKYKG ADSIKLLEFV GELLNKNNYK ISNIDATIIA QRPKMAPHIP TMRENIAKAL 
NIDLDQINVK ATTEEGLGFT GSGEGISSQS ICLLVK