| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2613 |
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| Symbol | |
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| ID | 4201765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2882619 |
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| End bp | 2883515 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638083480 |
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| Product | RNA pseudouridine synthase family protein |
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| Protein accession | YP_697003 |
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| Protein GI | 110800779 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAAAAG CATCAAAAAA TAACAATAGA AGAGATAAGA GTTTATCTAA TAAAAAGTTT
AAGAGTGAAG ATAAAAATTT AAATAAAACT AATAAAAATA ATAAACAAAA AGTAGCTAAA
AAGGCTTCAG TAAAAAATAC TATTATAGTA TCAAATAAAA ATGAAATAAG AGATAAAGTT
AGATTAAATA AATATATAAG TGAAACAGGA TTTTGCTCAA GGAGAGAGGC TGATAAGCTT
ATAGAACAAG GAAGAGTTAA GATAGATGGG CTAAAGGCTA CAACTGGTAT GAAGGTTTCT
AAGGGGCAAA GTGTATCTAT TGATGGAAAA CCTCTAAAGG TTGAAAATGA ACTAGTTTAT
ATAGCTTTAA ATAAGCCTGT TGGAATAACT TGTACTACTG AGAGCAAGAT AAAAGGTAAT
ATAGTTGACT TTATAAATCA TGAAAAAAGA ATTTTCCCAA TAGGAAGACT AGATAAGGAT
TCTCAAGGAT TAATATTTAT GACTAATGAT GGTGATATAG TTAATAAGAT ATTAAGAGCT
GGGAATAATC ATGAAAAAGA ATATATTGTC ACTGTAAATA AGTCTATAAC TGATGAGTTT
ATAAAAGGAA TGAGCAATGG AGTGCCTATA CTAGGAACAG TTACTAAGAA ATGCTTAGTT
AAGAAAGAAA GCAAAAACTC ATTTAGAATA ATACTAACTC AAGGGTTAAA TAGACAGATA
AGAAGAATGT GTGAGTATTT TGGATATGAG GTCAAAAAAT TAGAGAGAAT AAGAATAATG
AATGTTAGCC TAGGAAACCT AAAGATAGGA TCTTGGAGAT ACTTAACTAA GAAAGAATTA
GCTGAAATAA ACAGGTTAAC AGAAAACTCT TCAAAGACTG AAGAGGCTTC AATTTAA
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| Protein sequence | MRKASKNNNR RDKSLSNKKF KSEDKNLNKT NKNNKQKVAK KASVKNTIIV SNKNEIRDKV
RLNKYISETG FCSRREADKL IEQGRVKIDG LKATTGMKVS KGQSVSIDGK PLKVENELVY
IALNKPVGIT CTTESKIKGN IVDFINHEKR IFPIGRLDKD SQGLIFMTND GDIVNKILRA
GNNHEKEYIV TVNKSITDEF IKGMSNGVPI LGTVTKKCLV KKESKNSFRI ILTQGLNRQI
RRMCEYFGYE VKKLERIRIM NVSLGNLKIG SWRYLTKKEL AEINRLTENS SKTEEASI
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