| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2555 |
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| Symbol | |
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| ID | 4202848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2814863 |
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| End bp | 2816605 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638083422 |
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| Product | oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein |
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| Protein accession | YP_696945 |
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| Protein GI | 110799167 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA GAAAATTAGT TGCATTATTA ACGGCGGGGT TAGCAGCTTC AATGTTATTT
GTAGCATGTG GAGGAGGAGC TAACAATACA GCTCAAGGAA ATGGTAATGG TTCAGAATCA
GGAGGAACTA CTAAGGATTT ATCAAAGCCA GAGAGAATAG AGGCATCAAA TCCTAGTGCA
CTTCCAGATG CTGCAAAAAA TAGAACTGAT ACTTTAATAG TAGGAACTAC AGATCCAAAG
GGTGAATTTG TTCCAATATA TTCTTCTACT CTTTATGATT CATGGGTTAA CAAGTTAGTA
TTTGATGGAT TGATTACTAA TAATGAAAAG GGAGAACCAA TTCCAAATGT AGCAGAAAGT
TATGAAGTTT CTGAAGATGG AAAAACTTAT ACATTTAAAT TAAATAAGGG TATTAAATTT
ACTAATGGTC AAGAATTAAC AGCAAAGGAT GTAGCATTTA CATTTACTTC TATTTGTGAT
CCAGGATATG ATGGACCAAG AATGGATGCT GTAAATAATT TAGTTGGATA TGAAGAGTAC
AATAAGGGTG ATGCTAGTAG TGTTGAAGGT ATAAAGGTTA TTGATGATTA TACAATATCA
TTCACTAACA AGAATACTGA TGCAGCTGGT ATATGGAATT TTGAATATGG AATTATGCCT
GAAAGTGTTT ATAAATTTGA AAAAGGAAAC TTCCAAGCTG TTAAGGATAA ATTATTAGAG
CCAGTAGGTT CAGGTGCTTA TAAATTTGTT CACTTTAAAC CAGGACAAGA AGTTAAGTTT
GAAAAAAATG CTGATTACTG GAAAGGGGAG CCGAAGATTC CTTATATAGT AATGAAAGTT
ACAAATGCAC AAACATTATT ACAAGAATTA ATGGCTGGAA CAGTTGATAT AGATAGAGTT
GGTGCTAAAC CAGAAAATAT AGATCCATTA AAACAAGCTG GATTCTTAAA CTTAGATCTT
TATATGCAAA ATGGTTATGG ATACATGGGA CTTAACTATG GAAGTGATAA GGTTAAAGAC
CCTAAAGTAA GACAAGCGTT ACTTTATGGA TTAAATAGAG AAGGATTCAT GCAATCTTAT
TATCAAGGAT ACGGTCAAGT TTACAACTCA CACATTCTTC CTACTTCATG GGCATATAAC
CCAGATGTTC CTAAGTATGA ATACAATCCA GAAAAAGCTA AAGAATTACT TGATGAAGCT
GGTTGGAAAG ATACAAATGG AAATGGAGTT AGAGATAAGG ATGGAGTTGA ATTAGAACTT
CAATGGTTAA CTTATACTGG TTCTAAATAT GTTGATGCTT TAATCCCAAT AGTTCAACAA
TCTTGGGAAC AAATAGGTGT TAAAGTTACT CCAGAACTTA TGGAATTTGG AACAATGATG
GATAAAGTTA ATAACAGAGA ATATGATATA TTCAATGGTG CTTGGAACCT TTCAATAGAT
CCAGATCCAT CAGGAATATT TGCAATTTCT CAAGATGTAC CAGGCGGATT TAATAATATT
GGATGGAGAA ATGAAGAAGC AGATAAGTTA TTAAAAGAAG GTAAAGGAAC AACAAATCAA
GAGGAAAGAA AGAAAGCTTA TGCTGAATGG CAATTAAAAT TCTCTGAAGA TGTACCTTAT
ATTCTTCTTG GAAATGCACA AGAAATGTTT GCATCAAATT CAAGAGTTAA AGGATATAAC
CCATCAACTT ATATAGATTG GACTCACGAC ATTTACAAAC TTGAATTAGA TAACAATAAA
TAA
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| Protein sequence | MKKRKLVALL TAGLAASMLF VACGGGANNT AQGNGNGSES GGTTKDLSKP ERIEASNPSA
LPDAAKNRTD TLIVGTTDPK GEFVPIYSST LYDSWVNKLV FDGLITNNEK GEPIPNVAES
YEVSEDGKTY TFKLNKGIKF TNGQELTAKD VAFTFTSICD PGYDGPRMDA VNNLVGYEEY
NKGDASSVEG IKVIDDYTIS FTNKNTDAAG IWNFEYGIMP ESVYKFEKGN FQAVKDKLLE
PVGSGAYKFV HFKPGQEVKF EKNADYWKGE PKIPYIVMKV TNAQTLLQEL MAGTVDIDRV
GAKPENIDPL KQAGFLNLDL YMQNGYGYMG LNYGSDKVKD PKVRQALLYG LNREGFMQSY
YQGYGQVYNS HILPTSWAYN PDVPKYEYNP EKAKELLDEA GWKDTNGNGV RDKDGVELEL
QWLTYTGSKY VDALIPIVQQ SWEQIGVKVT PELMEFGTMM DKVNNREYDI FNGAWNLSID
PDPSGIFAIS QDVPGGFNNI GWRNEEADKL LKEGKGTTNQ EERKKAYAEW QLKFSEDVPY
ILLGNAQEMF ASNSRVKGYN PSTYIDWTHD IYKLELDNNK
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