Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2552 |
Symbol | |
ID | 4202901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2811903 |
End bp | 2812880 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638083419 |
Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein |
Protein accession | YP_696942 |
Protein GI | 110800549 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAAA CATTAGTAGA ATTTAAAAAT CTTGAAACTC ACTTTCATAC AGGTGAGGGA ATTGTTAAAG CAGTAAATAA CGTTAGTTTT AAAATAAAAG AAGGGGAGAC AGTTTGTGTA GTTGGAGAAT CTGGATGCGG AAAATCTGTT ACTGCCATGT CTCTTATGAG ATTAATACCA AGTCCTCCTG GAAAAATAGT TGGAGGAGAA ATTCTTTTTG AGGGAAAAGA TGTTTTAAAG TTCACAGAGC AAGAACTTAT GGATATGAGA GGAAATGATA TATCAGTTAT TTTCCAAGAA CCTATGACAT CATTAAACCC AGTATTTAAA ATAGGAGATC AAATTTGTGA AGCAATAATT CTTCATCAGC ATTTATCAAA AGAAGAAGCT GAAAAGAAAG CTATAGAAGT TTTAAAAATA ATTGGTATAG CTAGAGCAGA AGAAATAATG AAATCTTATC CTCACGAATT ATCAGGAGGA ATGAGACAAA GAATTATGAT TGCTATGGCA GTTTGTTGTA ATCCTAAGCT TTTAATAGCT GACGAGCCTA CAACTGCCCT TGATGTTACA ATTCAAGCAC AAATTCTAGA TCTTATGAGA GATATTAAAG AGAAATTAAA TACATCAATA TTATTAATAA CACATGACTT AGGAGTAGTT GCTGAAATGG CTGACTATGT TGTTGTAATG TATGCTGGTA AGGTTATTGA GGAAGCTCCA GTTTTAGAGC TTTTTAAAAA TCCTCTTCAT CCATATACAC AAGGTTTACT TAAATCTAAG CCATCAGTTA ATGGAAATGA AACTAGACTT TATTCAATAC CAGGACAAGT TCCTAATCCG GTAGGTATGC CAGATAATTG CTACTTCAAT GAGAGATGTG ATAGATGTAT GGAAAAATGT AAGGATGTTC AACCTACTCT TGTTGATGTA GGAAATAGAC ATAAAGTTTC ATGCTGGTTA TATAAGGAGG GAAAGTAG
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Protein sequence | MGKTLVEFKN LETHFHTGEG IVKAVNNVSF KIKEGETVCV VGESGCGKSV TAMSLMRLIP SPPGKIVGGE ILFEGKDVLK FTEQELMDMR GNDISVIFQE PMTSLNPVFK IGDQICEAII LHQHLSKEEA EKKAIEVLKI IGIARAEEIM KSYPHELSGG MRQRIMIAMA VCCNPKLLIA DEPTTALDVT IQAQILDLMR DIKEKLNTSI LLITHDLGVV AEMADYVVVM YAGKVIEEAP VLELFKNPLH PYTQGLLKSK PSVNGNETRL YSIPGQVPNP VGMPDNCYFN ERCDRCMEKC KDVQPTLVDV GNRHKVSCWL YKEGK
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