Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2496 |
Symbol | gcp |
ID | 4201125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2767969 |
End bp | 2768988 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638083361 |
Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
Protein accession | YP_696910 |
Protein GI | 110798788 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAA AAATTATATT AGCAATAGAA AGTAGTTGTG ACGAAACAGC GGCAGCTGTA GTAGTCAATG GTAGAGAAGT TTTATCAAAT ATAATATCTT CTCAGATAGA TATACATACA AAATTTGGTG GAGTAGTTCC AGAGGTTGCA TCAAGAAAAC ACATAGAAGC TATAAATGCA GTAGTAGAGG AAGCCTTAGA AGTTGCAGGA GTAACATTTG ATGACATAGA TGCAATAGCA GTTACATATG GTCCTGGTTT AGTTGGAGCA CTTTTAGTAG GACTTCAATA TGCTAAAGGA TTAGCATACT CTTTAGATAA ACCATTAATA GGAGTTAACC ATATAGAAGG GCATATAAGT GCTAACTTTA TAGATCATAA AGACTTAGAA CCACCTTTTG TTTGTTTAGT TGTTTCAGGA GGACACACTT TTGTAGTCCA TGTTGAAGAC TATGGAAAGT TTGAAATAAT AGGTGAAACA AGAGATGATG CAGCAGGAGA AGCTTTTGAC AAGGTAGCAA GAGCCGTAGG ATTAGGATAT CCAGGAGGAC CTAAAATAGA TAAATTAGCT AAGGAAGGAA ATAGTGATGC TATAAAATTC CCAAAAGCTA ATTTCCATGA TGATACCTTA GATTTTTCAT TTAGTGGAGT TAAATCAGCT GTATTAAATT ATCTAAATAA GATGGAAATG AAAAATGAAG AAATAAATAA AGCTGATGTT GTAGCTAGTT TCCAAAAGGC CGTAGTTGAA GTATTAACTG ATAATGCAAT AAAAACTTGT AAGATGAGAA AGGCAGATAA AATAGCCATT GCAGGTGGAG TTGCTTCTAA TAGTGCTTTA AGAGAAAATC TTCTTAGAGA AGGAGAAAAG AGAGGAATAA AGGTTTTATT CCCATCACCA ATACTTTGTA CAGATAATGC TGCCATGATA GGAAGTGCTG CATATTTTGA ATTATTAAAG GGAAATGTAT CTGAAATGAG TCTTAACGCA AAACCTAATT TAAGATTAGG AGAAAGATAG
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Protein sequence | MDKKIILAIE SSCDETAAAV VVNGREVLSN IISSQIDIHT KFGGVVPEVA SRKHIEAINA VVEEALEVAG VTFDDIDAIA VTYGPGLVGA LLVGLQYAKG LAYSLDKPLI GVNHIEGHIS ANFIDHKDLE PPFVCLVVSG GHTFVVHVED YGKFEIIGET RDDAAGEAFD KVARAVGLGY PGGPKIDKLA KEGNSDAIKF PKANFHDDTL DFSFSGVKSA VLNYLNKMEM KNEEINKADV VASFQKAVVE VLTDNAIKTC KMRKADKIAI AGGVASNSAL RENLLREGEK RGIKVLFPSP ILCTDNAAMI GSAAYFELLK GNVSEMSLNA KPNLRLGER
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