| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2479 |
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| Symbol | |
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| ID | 4203754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2750649 |
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| End bp | 2752211 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638083344 |
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| Product | lysM domain-containing protein |
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| Protein accession | YP_696893 |
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| Protein GI | 110799972 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTTAATT TAGATATTAT TAAAGAAAGT CTTGGGTTTG AGAAGGTCTT AAGTGAAAAC
TCTTTAGATA TACCTTTTAG AGAAGAATAC TTAATACCAG ATACTCAACC AGATGTTCAT
GATGTACTTT CAGTTGATAC TAAAGTATAT GTGCTTAACA GAGAAGTTCA AAGTGATAGA
GTATTATTAG AATATGAAGT TGAGTGTAAT ATTATGTACT TAGCTAGAGA AGAAGAAGGT
TTAGGGATAA ATAGCGTTAT TTATAAAGAA AAAAATTCTA GCTTTATTGA TATAGCTGGG
GCTGAACATA GTATGATGTG TGATATGGAA TGTGATTTAG AACATATCGA TGCGAACATA
ATCAATGAAA GAAAGATAAG AGTAGAAGGA AAACTAAGAA CCAAGTACAG GGTTTATAAA
GAAGAAAAAA TAGATGTTGT TAAAGAATTA GATGGTTTAG GTGATTTACA AATAAAAAGA
AAACCAGAAA GTATAGAGAA AAATATTACA AATATGGTTT GTTCAATGAG TGGAGAATTA
CCTATAAACG TAGGTATGGA TAAACCTCAA ATAGGAAAAA TAATAAAATG TGGATATATG
CTTCATAGAC AAGAGATAAA ATTAGGAGAA GATAAAGTAC AAGCATCTTG CTTGGCTAAA
ATTAACGTTC TTTATAGAGC TTATGATTCT AGAGAGGTTG TAGCTTTAGA AGAGGATTTA
TATTTATCTA ATGATGAAGA GGTTGTAGGT GTAAATTCAG ATATGAATTG TAATGGATAT
TTTGAAATCA AAGGTCATGA TGTGAAGATT TCTCAAAATG ATTTAGGGGA AAGTAGAATA
ATAGATGTTA ATTTATCTGT TGATGCAAAT GTTGCAATAT CAAAATTAGA ATTTGCAGAA
ACAGTTGAGG ACTTATATTC ACCAACGCAA AATGTAATGC CTTTAAAGGA AGTTTGCAAG
ATTAATATGG CTGTTAGTGA AAATTCAAAT GAATCAGTAA TAAAAGGAAA TATAGACTTA
GGAAAAAATG GAGTAGATGC TACTCAAACA GTTGATTGTA AAGGTAAAAT AGTAGATATG
GAAAGCTATT TTATGGATCA AAAGGTTGTT ATAAAAGGTA ATTTATCTGT TGAATCAATA
TACAAGACAA CTGATGAGGA AAAGGGACTT AATAAAGTAA GTGGAGAAAT TCCTTTTGAA
GTTGCTTTAG ATATGCCAAA TTCTCAGTCT GGTATGACTT TTGATACTAA GGCTAATTTA
GAAGATTTAC AATGTAGTAT AGAAGGAAAT AGCTTAGCAG TTAAAGCAGT AGTATATTTT
TATGCTAAAT GTTCAGATGT TTTTGATAAA GAATATGTTA AAGACATTGA ACAAAATGAT
GACACTGTTG AAAAGAAAGC ATCCATTACT ATATATACAA TTCAAAAAGG TGATACTTTG
TGGAATTTAG CAAAAAAATA TAAGACAACA ATAGATACTT TAGTTAAATT AAATGATATA
GAAGATCCAG ATTCTATATA TGCTGGCGAT AAAATTATGA TTCCAGGAAG AGCAGTTTTA
TAA
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| Protein sequence | MVNLDIIKES LGFEKVLSEN SLDIPFREEY LIPDTQPDVH DVLSVDTKVY VLNREVQSDR
VLLEYEVECN IMYLAREEEG LGINSVIYKE KNSSFIDIAG AEHSMMCDME CDLEHIDANI
INERKIRVEG KLRTKYRVYK EEKIDVVKEL DGLGDLQIKR KPESIEKNIT NMVCSMSGEL
PINVGMDKPQ IGKIIKCGYM LHRQEIKLGE DKVQASCLAK INVLYRAYDS REVVALEEDL
YLSNDEEVVG VNSDMNCNGY FEIKGHDVKI SQNDLGESRI IDVNLSVDAN VAISKLEFAE
TVEDLYSPTQ NVMPLKEVCK INMAVSENSN ESVIKGNIDL GKNGVDATQT VDCKGKIVDM
ESYFMDQKVV IKGNLSVESI YKTTDEEKGL NKVSGEIPFE VALDMPNSQS GMTFDTKANL
EDLQCSIEGN SLAVKAVVYF YAKCSDVFDK EYVKDIEQND DTVEKKASIT IYTIQKGDTL
WNLAKKYKTT IDTLVKLNDI EDPDSIYAGD KIMIPGRAVL
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