Gene CPF_2466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2466 
SymbolprfA 
ID4202688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp2735105 
End bp2736187 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content33% 
IMG OID638083331 
Productpeptide chain release factor 1 
Protein accessionYP_696880 
Protein GI110799590 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000000799175 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACTTG ATAGATTAAA TTTTATTGAA AATAAATATG ATGAACTTTC AGTTAAGATT 
AGTGATCCTT CAATAATGGC TAACCAAAAA GAGTGGAGAA AGCTTTGTAA GGAACACGCT 
GACTTAGAAG TTATAGTTAA TAAGTACAAA GAGTACAAAG AAGCGACAGA AGAATTAGAA 
GCTAACAAAG AGATGCTTTC AGAAGAAAGT GATCAAGAAA TGAGAGAAAT GATAAACTCT 
GAAATCAAGG ACTTAACAGA AAGAAAAAAA GAATTAGAGG ACGAAATACA AATTCTTTTA 
CTACCAAAAG ATCCTAATGA TGATAAAAAC GTATTTGTTG AAATCAGAGG TGGTGCTGGT 
GGAGATGAAG CAGCACTATT TGCAGCTAAT CTTTTCAGAA TGTACACTAA ATACGCTGAA 
AAGAATAGAT GGAAAGTTGA ACTAATGAGT GCAAATGAAA CTGACATTGG AGGTTTCAAA 
GAGGTTGTAT TCATGATAAA AGGAGCAGGT GCTTATTCAA AACTTAAATA TGAGAGTGGA 
GCACACAGAG TTCAAAGGGT TCCTGATACA GAAAGTTCAG GAAGAATACA TACTTCAACT 
GCTACAGTAG CTGTTTTACC AGAAGTTGAT GATGTAGAAA TAGAAATAAA CGATAAAGAT 
ATTAAAATAG ACGTATTTAG AGCATCAGGT AATGGTGGTC AGTGCGTTAA CACAACTGAT 
TCAGCTGTAA GAATAACTCA CTTACCTTCA GGATTAGTTG TTTCATGTCA GGATGAAAAA 
TCACAGCTTA AAAATAAAGA AAAAGCTATG AAAGTATTAA GAGCAAGATT ATTCGAGCAA 
GCTGAAGCTG AAAGATTAGC TGGTATTGCT GAAGATAGAA AGAGTCAGGT TGGTACTGGA 
GATAGAAGTG AAAGAATAAG AACTTACAAC TATCCACAAG GAAGAGTAAC TGATCACAGA 
ATAAACATGA CTTTATATAA ATTAGATAGT TTCTTAGAAG GTGACATAGA CGAAATATTA 
AATGCTCTAA TTACTGAAGA TCAAGCTCAA AAGATGAAAG CAATGGGTAA TACTGAATTT 
TAA
 
Protein sequence
MILDRLNFIE NKYDELSVKI SDPSIMANQK EWRKLCKEHA DLEVIVNKYK EYKEATEELE 
ANKEMLSEES DQEMREMINS EIKDLTERKK ELEDEIQILL LPKDPNDDKN VFVEIRGGAG 
GDEAALFAAN LFRMYTKYAE KNRWKVELMS ANETDIGGFK EVVFMIKGAG AYSKLKYESG 
AHRVQRVPDT ESSGRIHTST ATVAVLPEVD DVEIEINDKD IKIDVFRASG NGGQCVNTTD 
SAVRITHLPS GLVVSCQDEK SQLKNKEKAM KVLRARLFEQ AEAERLAGIA EDRKSQVGTG 
DRSERIRTYN YPQGRVTDHR INMTLYKLDS FLEGDIDEIL NALITEDQAQ KMKAMGNTEF