Gene CPF_2464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2464 
Symbol 
ID4203922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2733361 
End bp2734413 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content31% 
IMG OID638083329 
ProductSua5/YciO/YrdC/YwlC family protein 
Protein accessionYP_696878 
Protein GI110800830 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA AAGTACAATT CATAAAAGAT ATAGATAAAG ATATAAAATA TTTAGAGGAA 
GCCGCTGAAA TAATAAAAAA TGGTGGTATT GGGGCATTTC CTACTGAAAC AGTTTATGGA
TTAGGCGCAA ATGCTTTAGA TGGAGAAGCT GTTAAAAAGA TTTTTGTGGC AAAGGGAAGA
CCGCAGGATA ATCCTTTAAT AATACATATA GCTGATAAAA AAGATATAGA TAAATATGTT
GCTGAAATAC CTAAATATGC ACAGGAGTTA ATGGATAAAT TTTGGCCAGG TCCTTTAACA
ATAATATTAA AGAAAAAAGA TATAGTTTCA GATGTTACAT CAGCAGGTTT AGATACAGTT
GGCGTTAGAA TGCCAAATGA TGAAATAGCC TTAAAGCTAA TAGAACTATC AGGAGTTCCA
ATAGCAGCAC CATCAGCTAA TATATCAGGA AGACCAAGTC CTACAGATAT AGAAAGATGT
GAAGAAGACT TAAATGGAAG AGTTGATTTT ATAATAGGAG CTAAAAAAAG TGAAATAGGA
GTAGAATCAA CTATAGTAGA TGCAACTGGT GAACATTTAT GCGTTTTAAG ACCTGGAGGC
ATAACTTTAG AGATGTTAAA GGACATAGAT GAAGGAGTAT ATATAGATAA AGCTATATTA
ACTACTTTAG ACAAAGACAC AAAACCTAAG GCACCGGGAA TGAAGTATAA ACATTATGCA
CCAAAGGCAA AAGTTAGAAT GGTTCAAGGT CCAATAAATA AAATGGTTGA AAAAATTAAA
GAAATAGTGC ATAATTACAT AGATGAAGAT TTAAAAGTCG GAATTATGGC AACTGATGAA
ACAATTTCTA TGTACAATGA AGGAATAGTA AAATCATTAG GAACTAGAGA AGACTTAACT
TCTGTAACAA AAAATTTATT TGAAATGCTT AGAGCTTTTG ATGACTTAGG GGTAGATGTT
ATAATAACTG AGGCTTTTGA GGAAAAAGAT TTAGGTGTAG CCATAATGAA TAGATTAAAA
AAATCCTGTG GATTTGACAT AACAATAGTT TAA
 
Protein sequence
MKTKVQFIKD IDKDIKYLEE AAEIIKNGGI GAFPTETVYG LGANALDGEA VKKIFVAKGR 
PQDNPLIIHI ADKKDIDKYV AEIPKYAQEL MDKFWPGPLT IILKKKDIVS DVTSAGLDTV
GVRMPNDEIA LKLIELSGVP IAAPSANISG RPSPTDIERC EEDLNGRVDF IIGAKKSEIG
VESTIVDATG EHLCVLRPGG ITLEMLKDID EGVYIDKAIL TTLDKDTKPK APGMKYKHYA
PKAKVRMVQG PINKMVEKIK EIVHNYIDED LKVGIMATDE TISMYNEGIV KSLGTREDLT
SVTKNLFEML RAFDDLGVDV IITEAFEEKD LGVAIMNRLK KSCGFDITIV