Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2463 |
Symbol | rpiB |
ID | 4201818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2732648 |
End bp | 2733097 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638083328 |
Product | ribose-5-phosphate isomerase B |
Protein accession | YP_696877 |
Protein GI | 110800386 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01120] ribose 5-phosphate isomerase B |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAG CAATTGGTTG TGATCATGGT GGATTTAATT TAAAAAACAC AGTGATAAAA CATTTAGAAG AAAAAGGTAT TGAGGTAAAA GATTTTGGTA CATACAGCAC AGATTCTTGT GATTACCCTG ATATATCTAT ACAGGTTGCA GAAGCTGTAG CTAAAAAAGA ATTTGAATAT GGTATATTAA TCTGCGGAAC TGGTATAGGA ATATCTATAG CAGCAAATAA AGTGCCAGGA ATAAGAGCAG CATTATGTTC TGATACATTT AGTGCTCATG CAACAAGACA ACATAACAAT GCAAATATTC TAGCTATGGG TGAGAGAGTT GTAGGACCAG GATTAGCGTT AGATATAGTT GATACTTTCT TAAATTCAGA ATTTGAAGGT GGAAGACACC AAAATAGAAT AGATAAAATA ACAGCTATTG AAGAAAAGTA TTCAAAATAA
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Protein sequence | MKIAIGCDHG GFNLKNTVIK HLEEKGIEVK DFGTYSTDSC DYPDISIQVA EAVAKKEFEY GILICGTGIG ISIAANKVPG IRAALCSDTF SAHATRQHNN ANILAMGERV VGPGLALDIV DTFLNSEFEG GRHQNRIDKI TAIEEKYSK
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