Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2448 |
Symbol | spoIID |
ID | 4201785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2718621 |
End bp | 2719643 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 638083313 |
Product | stage II sporulation protein D |
Protein accession | YP_696862 |
Protein GI | 110798809 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG2385] Sporulation protein and related proteins |
TIGRFAM ID | [TIGR02669] SpoIID/LytB domain [TIGR02870] stage II sporulation protein D |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAATA GAAAAATTTT AGAATCAGTA ATTTTTATTG TAACAATTAT AGTGAGTATA GTTTTTATAC CAATACTTTT TGGTTTTTTA TCTAGTTCAA GTATGGCTGA AAGTAATAAT AAAGTAGAGA AAGTTAAAAA TAAAAAGTTA GTTGATGTAG TTAACTTAAA GGAAGTTGAA GTTTACATAT CTAAAGAAAA TAAAGTGGAA AAAGTACCAT TAGAGGAATA TGTCTTATCT GTAGTTTCAA GTGAAATGCC AGCTACTTTT CATGAAGAGG CATTGAAAGC TCAGTCTATT TTAGCAAGGA CATTTGTTAT AAATAAATTA ATTACTGGAT GTAACAATAT AAAGGAAGGA AATATATGTG ATACTACTCA TTGTCAAGCA TATTTAAATA TTAATGAAAA GAAAAAAGCT TGGGGTAAAG ATGGGGATGA ATATTTAAAA AAATTAAAAA AAGTTGTTAA AGAAACAGAG GGGAAAGTTC TATCATATAA TGATCAGTTA GTAAAATATC CTCAATATTT TTCTACAAGT TCAGGAAATA CAGAGGATGC AGTTGCTGTA TTTTCAGAAG ATGTACCTTA CTTAAAGTCA GTTGAAAGTC CAGGGGAAGA AATATCACCT AAATATGAGA GTGAAATCAG TATTTCTATA AGTGATTTTA AGAGTAAAAT TAAAAAATCT ATTCCTAATA GTGATTTAGG AAATAATATA ACTGAAGAAG TTAAAATATT AAATAGGAAC ACAGGAGGAA CTGTAAATGA CATAAAAATA GGGGAAGCTA CCATTAAGGG GAAGGAATTT AGAAAAATAT TTGGACTAAA TTCTGCCAAT TTTACATTGG AAGTTTTAGA TGACAACATA AAAATAAAAT GTTTAGGATA TGGACATGGT GTTGGCATGA GTCAATGGGG AGCTAATGTA ATGGCAAAGG AAGGCAGTAA ATATGATGAA ATATTAGAAC ATTATTTTAA AGGAAGTAAA ATTGAAGAAA GTAATAAAAT TTTAATAGAG TAA
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Protein sequence | MINRKILESV IFIVTIIVSI VFIPILFGFL SSSSMAESNN KVEKVKNKKL VDVVNLKEVE VYISKENKVE KVPLEEYVLS VVSSEMPATF HEEALKAQSI LARTFVINKL ITGCNNIKEG NICDTTHCQA YLNINEKKKA WGKDGDEYLK KLKKVVKETE GKVLSYNDQL VKYPQYFSTS SGNTEDAVAV FSEDVPYLKS VESPGEEISP KYESEISISI SDFKSKIKKS IPNSDLGNNI TEEVKILNRN TGGTVNDIKI GEATIKGKEF RKIFGLNSAN FTLEVLDDNI KIKCLGYGHG VGMSQWGANV MAKEGSKYDE ILEHYFKGSK IEESNKILIE
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