Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2433 |
Symbol | |
ID | 4202799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2708929 |
End bp | 2711163 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638083298 |
Product | RecD/TraA family helicase |
Protein accession | YP_696854 |
Protein GI | 110800894 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCAT TAAATGGAAT AGTTGAGAGT ATAGTATTTA AAAGCTCAGA TACAGGGTAT ACAGTTATAA AATTTAGAGA AAATAATATT ATTCATACAG CAGTGGGAGT TTTACCACAT GTAAAAGAAG GTCAAAATTT AAAAATTACA GGAAGTTGGG TTAACCATTC CCAGTTTGGA AAACAATTTA AGGTAGAAGA ATGTGAAGAG ATATTACCTA CTTCAAAGGA TGGAATAGAA AAATATTTAT CTTCTGGGAT AATACAGGGA ATAGGACCTG TTACGGCAAA AAAAATTGTA AATAAATTTG GAGAAGATAC TCTTAATATT TTAGATAATA ATATTGAGAG ATTAAAAGAA ATAGAAGGAA TAGGTAAAAA GAAGTTAGAG ACCATAATTG AGTCTTATAG AGAACAAAGA GAATTAAAAA ATATAACTAT ATTTTTGCAA ACCCATGGAT TAAGTGTAAA TCAATGTTTG AAGATTTATA AAAAATATGG AGCTAGTTCA GTTGATACAG TTAAAAATAA TCCATATATA CTTTGTGATG AAATTTCAGG AATAGGATTT AAGACTTCTG ATAAGATTGC TAGAAGTTTA GGAATAGAAA TTGACTCACC TTTTAGAATT CAAAGTGGTA TAAGATACGT AATAAATGAA TTTTGTGCTA ATGGACATAC TTTTATGCCA AAGGATGAAC TTATAAAGGA AGCAAGTAAT GTATTAACTG TAAGTGGAGA TATAATAGAA GAAAATATTA AAAATGCAGC TTTAGATAGA AAAATAAAGT TAGAGAAAGT TAATGATAAA GAAGGTGTTT TCACAATACC TAATTATTAT TGTGAGCTTG GAATAACTAA TAGGATTTTA ACTTTAGCTA TAAGCAATTT CCAAGATATA AGTGTAGATG TTGAGCACTT AATACTTCAA TTTGAAAAGA AAAATAATAT AACTTTTGCA GAATCCCAGA AAGATGCTAT AATAAGTGCT TTTCAAAATG GAATAGAGAT AATAACTGGG GGACCAGGAA CAGGAAAGAC CACTATAATA AAGTGTATAA TTGAAATTTT TGAAACTTGT GGTTTGAAGG TTCTTTTGGG AGCACCTACT GGAAGAGCGG CTAAAAGAAT GAGTGAATCT ACAGGAAAAG AAGCTACTAC AATACATAGA ATGCTTGACA TGGGAGTCTT TGAAAAAGAA GAAAGTGTTT TTGTAACCAA TGCAGAGGAA CATTCCTTAG AGGCTGATGT GGTTATAATA GATGAGGCAT CAATGATTGA TATAACTTTA ATGAATGCTT TACTTAAATC TATTAAGGTA GGTACTAGGC TTATAATAGT AGGAGATGTT GATCAGCTTC CATCAGTAGG AGCTGGAAAT GTATTAAATG ATTTTATAGA GAGTGGATTT ACAAAGGTTG TACGTCTAAA GGAAATATTT AGACAAGGAA AAGAGAGTAT GATTGTAGTA AATGCACATA AAATAAATAA AGGTGAGATG CCTAAGTTAA ATGAAAAAGG TACTGATTTC TTCTTCATAA GAAATGATAT TCAAGAGGGA ATATTAAATA CTATTATAGA TTTAATAAAT ACTAGGTTGC CTAAGTTTAA CTCAAATTGG GATAAGTTAA AAAGTATACA GGTTTTAGTT CCTATGAAAA AGGGTGTATT AGGAGTTACA AATTTAAATG AAAGAATTCA AAATGTCTTA AACCCAAAGG CTCCATATAA AAAAGAAAAA GAATTTAGAA GTATGGTATT TAGAGAGGGA GATAAGGTTA TGCAGATAAA GAATAACTAC TCTCTAAAAT GGACCAGAAT AGCTGGAAAA GGTGAGCATG AAGGCTTGGG TGTATTTAAT GGAGATATGG GATTTATAGA AAGTATAGAT TTAGAAGGGA AAAAACTATC TATAATCTTT GATGATGAAA GAAGAGTTAT TTATGATTTT ATGTATTTAG ATGAATTAGA TTTAGCTTAT GCAATCACAA TACATAAAAG TCAAGGAAGT GAATTCCCTG TAGTAATAAT ACCTGCATAT ATGGGTGCAC CATTACTTAT GAATAGAAAT TTATTATATA CAGGAATAAC TAGGGCAAAA GAAATGGTTG TAGTAGTTGG AATACCTAAA GCATTAAAAT ATATGGTTGA TAATACAAGG AGTATGGAAC GTTATTCCTC TTTAAATTGG AGAATAAAAG AAGTAATATC TAATGAGGTT TTTGAACAAG ATTAA
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Protein sequence | MEALNGIVES IVFKSSDTGY TVIKFRENNI IHTAVGVLPH VKEGQNLKIT GSWVNHSQFG KQFKVEECEE ILPTSKDGIE KYLSSGIIQG IGPVTAKKIV NKFGEDTLNI LDNNIERLKE IEGIGKKKLE TIIESYREQR ELKNITIFLQ THGLSVNQCL KIYKKYGASS VDTVKNNPYI LCDEISGIGF KTSDKIARSL GIEIDSPFRI QSGIRYVINE FCANGHTFMP KDELIKEASN VLTVSGDIIE ENIKNAALDR KIKLEKVNDK EGVFTIPNYY CELGITNRIL TLAISNFQDI SVDVEHLILQ FEKKNNITFA ESQKDAIISA FQNGIEIITG GPGTGKTTII KCIIEIFETC GLKVLLGAPT GRAAKRMSES TGKEATTIHR MLDMGVFEKE ESVFVTNAEE HSLEADVVII DEASMIDITL MNALLKSIKV GTRLIIVGDV DQLPSVGAGN VLNDFIESGF TKVVRLKEIF RQGKESMIVV NAHKINKGEM PKLNEKGTDF FFIRNDIQEG ILNTIIDLIN TRLPKFNSNW DKLKSIQVLV PMKKGVLGVT NLNERIQNVL NPKAPYKKEK EFRSMVFREG DKVMQIKNNY SLKWTRIAGK GEHEGLGVFN GDMGFIESID LEGKKLSIIF DDERRVIYDF MYLDELDLAY AITIHKSQGS EFPVVIIPAY MGAPLLMNRN LLYTGITRAK EMVVVVGIPK ALKYMVDNTR SMERYSSLNW RIKEVISNEV FEQD
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