Gene CPF_2424 details

Gene Information

• Locus tag: CPF_2424
• Symbol: rimI
• ID: 4200948
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 2696870
• End bp: 2697316
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 638083289
• Product: ribosomal-protein-alanine acetyltransferase
• Protein accession: YP_696845
• Protein GI: 110798748
• COG category: [R] General function prediction only
• COG ID: [COG0456] Acetyltransferases
• TIGRFAM ID: [TIGR01575] ribosomal-protein-alanine acetyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 52
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTCAT ATAAAATAGA ACTTATGAAT TCTTCCCATG TTAAGGGCGT TTTTGAAGTA 
AGTAAACTTA GTCTTGCAGA ATCTTGGAAT ATAGATTCTA TAGAAAAAGA ACTTTCTAAT 
AAACTAGCAA AATATCTTGT TGCTTTACAT GGAGACAAGG TTATTGGCTT TGTTGGAATG 
TGGATTGTTT TTCATGAGGG AGATATAACT AACGTAGCAG TTCATCCTGA ATATAGAAAA 
CAAGGAATTG GAAATCTTTT AATAGATAAT CTAATTACTT TATGTAAAGA AAATAATATA 
AATTCTCTTA CATTAGAAGT TAGAGAGTCT AATATTCCTG CTCAATCCCT TTACAAAAAG 
CATGGATTTA AGGAAGAAGG GATAAGAAAA AACTTCTACA ATAATCCAAA AGAAAACGCC 
ATAATAATGT GGAGACATGA TATTTAG 

 

Protein sequence

MNSYKIELMN SSHVKGVFEV SKLSLAESWN IDSIEKELSN KLAKYLVALH GDKVIGFVGM 
WIVFHEGDIT NVAVHPEYRK QGIGNLLIDN LITLCKENNI NSLTLEVRES NIPAQSLYKK 
HGFKEEGIRK NFYNNPKENA IIMWRHDI