| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2413 |
|---|
| Symbol | |
|---|
| ID | 4203105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2686393 |
|---|
| End bp | 2687289 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638083278 |
|---|
| Product | ABC transporter, substrate-binding protein |
|---|
| Protein accession | YP_696836 |
|---|
| Protein GI | 110801184 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.423087 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAGA AATTAGTATC GATTTTTTTA GGAGTAACAA TGGCTGCTTT TTTTGTTGGG
TGTCAAAGTA CTAAAACAGC AGAAAATAAA AAGGATAACG GTAAGGTTGA TGTCACTGTA
AGTATTGAAC CTTTAAGAGA GTTTACTGAA ATAGTTGGTG GAGATAAGGT AAATGTTAAG
ACTATGGTTC CAAATGGAAC AGAGCCACAT GATTTTGAAC CAAAAACTCA AGATTTATTA
GAGTTAAATA AGGCTAAGGT TTTTGTTTAT AATGGATTAG GTATGGAACA CTGGAAAGAG
CAAGTTCTTA ATACAATAGA AAATAAAGAT GTAAAAGTGG TTGAAGCTTC TAAAGGGGCT
GAAGTATTAA AAGAAGGAGA TAAGGTAGAT CCTCATCTTT GGTTAAGCTT AGATGGAGCT
AAAATAGAAG CTCAAAACAT AAAAGATGCT TTAGTTGAGG TTGATTCAGA TAATAAAAGT
TATTACGAAG AAAACTTTAA AAAGTTTGCA GAGAAATTAG ATTCTTTAGC AAATGAGTAC
AAAGAAAAGT TTAATGGATT AGCTAATAAG GATTTTGTTA CTGGTCATGC TGCTTTTGGA
TACTTATGTA GAGAATTTGG ATTAAAACAA GTTAGTGTAG AAAACTTATT TGGAGAAGGA
GAAATAACTC CTCAAAAAAT GCAAGAGATA GTTGAGTTCT GTAAGAAAAA TGATATAAAA
ACAATTTTTA TGCCTGAGTT AGCAAGTGAA AAAATTTCTC AAACTTTAGC TAATGAAGTT
GGTGGAAAAA TTGAAAAAAT ATATACTCTA GAAAGCAATG AAGATGGTAT AAGTTATATA
GATGCTATGA AAGAAAATCT TTCAAAAATA TATAATGCCT TATCATCACA AAAATAA
|
|---|
| Protein sequence | MRKKLVSIFL GVTMAAFFVG CQSTKTAENK KDNGKVDVTV SIEPLREFTE IVGGDKVNVK
TMVPNGTEPH DFEPKTQDLL ELNKAKVFVY NGLGMEHWKE QVLNTIENKD VKVVEASKGA
EVLKEGDKVD PHLWLSLDGA KIEAQNIKDA LVEVDSDNKS YYEENFKKFA EKLDSLANEY
KEKFNGLANK DFVTGHAAFG YLCREFGLKQ VSVENLFGEG EITPQKMQEI VEFCKKNDIK
TIFMPELASE KISQTLANEV GGKIEKIYTL ESNEDGISYI DAMKENLSKI YNALSSQK
|
|---|
| |