Gene CPF_2409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2409 
Symbol 
ID4203083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2679498 
End bp2680400 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content26% 
IMG OID638083274 
Productexonuclease family protein 
Protein accessionYP_696832 
Protein GI110799345 
COG category[L] Replication, recombination and repair 
COG ID[COG2176] DNA polymerase III, alpha subunit (gram-positive type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.16874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGTATG TAATAATAGA CCTAGAATTT AATAATATGC AAAATATTAC AAAATTTTAT 
CCTAATATTT ATAATGAGCA GAAAGATTTA AAGGAATTAG ATTCCTATAA TGAAATAATA
GAGATTGGGG CTATAAAATT AAATAAGTTC ATGCAAGAGG TTGATGAGTT TAAGACATAT
ATTAAACCAT CAGTATTTAA GGTTTTAAAT CCAAAGATAA TAGATATAAC AGGAATAACT
GAAGATCATT TAAAAGATGG AATTAAATTC GAAGATGCCA TGGACAACCT TAAAGATTTT
ATTGGGGAAG ATGATATACT TTGTTCTTGG GCTACTGATG ACATTGTTCA CATAGTTAAT
AATGCTAAGT ATCATTCATA TAAGAATATA AGTTGGATAA AAAAATATAT TGATATACAA
AAATATTGCA CAAAGATATT AGCGCATAAA AAATCTTTAA GCTTAAAACA TGCTTTAGAA
GAGTTAAAGA TAAAAATGGA TAAAAGTAAA CTACATGATG CACTAAATGA TGCTGTTTAT
ACGGCAGAGG TTTTTAAAAG ATTATATAAT GGTAAAAAGG TAAAAGAGTA TATAGTAGAA
GATGTCTACA ATATGCCTTC TATAAGGGTT AAAGATTTAA AGAATTATAA TTTAGAGTGT
GAAGATGTAG AATTCAAATG CCCTAAATGT AATATTAAAG TTGAAATGGA CCATCCTTTT
AGATTATTTA GTTGGAGATT TGTATCAATA GGAAAATGTC CAAAATGCAA TAGAAATGTT
AGACAAGAGG TTGTACTAAA AAAGACCTTA TCAGGTAATT TAGTTTATGA ATCTACAAAC
TCTTTAATAA ATGACACAGA ATACATTGAT CTTGACTATA AATTTAAAAA GTTAGCTAAA
TGA
 
Protein sequence
MGYVIIDLEF NNMQNITKFY PNIYNEQKDL KELDSYNEII EIGAIKLNKF MQEVDEFKTY 
IKPSVFKVLN PKIIDITGIT EDHLKDGIKF EDAMDNLKDF IGEDDILCSW ATDDIVHIVN
NAKYHSYKNI SWIKKYIDIQ KYCTKILAHK KSLSLKHALE ELKIKMDKSK LHDALNDAVY
TAEVFKRLYN GKKVKEYIVE DVYNMPSIRV KDLKNYNLEC EDVEFKCPKC NIKVEMDHPF
RLFSWRFVSI GKCPKCNRNV RQEVVLKKTL SGNLVYESTN SLINDTEYID LDYKFKKLAK