Gene CPF_2399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2399 
SymbolradC 
ID4203766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp2669501 
End bp2670184 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content32% 
IMG OID638083264 
ProductDNA repair protein RadC 
Protein accessionYP_696822 
Protein GI110800059 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAA ATATAAGAAT TAATGAAATT CCATCTGGTG AGAGGCCAAG AGAAAAACTA 
CTTTTTTATG GAGCTCAGTT TTTATCTAAT GAGGAACTTT TAGCTATAAT TCTTAGAACT 
GGAAATAAGG ATTCAAATGT AGTTGAATTG TCTTATAGAA TAATACATAG TGTTGGTGGA 
TTGAATGGAC TTTTTAAAGC TTCAGCAAAG GAGCTTATGG AGGTAAAAGG TGTTAAGGAA 
GCTAAGGCAA CTCAAATTTT AGCCATGTGT GAATTATATA AGAGATTTAA GGTTTCTGAG 
TTAGCGCAGG TTAAAATTTC AAAGCCATCA GATGTAGCAA AATTGGTTTT AGATGAACTT 
AGAATGCTAC GTCAGGAAGT GTTGATTCTA ATAAACCTTG ATACTAAAAA TAAAGTAATA 
TCTAAAAAAG AAATTTTTAA AGGTGGGCTA AATTCTTCTT TAGTACACCC AAGAGAGATA 
TTTAGAGAGG CTGTTAAAGA TAGCGCAGCA TCTATAATTA TATGTCACAA TCATCCTTCA 
GGAGACCCAA CACCTAGTAG AGATGATATA AACATAACAA CAAGACTAAA AGAGTGTGGA 
AAAATGATGG GTATTGAGCT TTTAGATCAT TTAATAATAG GAGATAACAG ATTCATAAGT 
CTTAAAGAAA AAGACATATT GTGA
 
Protein sequence
MSKNIRINEI PSGERPREKL LFYGAQFLSN EELLAIILRT GNKDSNVVEL SYRIIHSVGG 
LNGLFKASAK ELMEVKGVKE AKATQILAMC ELYKRFKVSE LAQVKISKPS DVAKLVLDEL 
RMLRQEVLIL INLDTKNKVI SKKEIFKGGL NSSLVHPREI FREAVKDSAA SIIICHNHPS 
GDPTPSRDDI NITTRLKECG KMMGIELLDH LIIGDNRFIS LKEKDIL