Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2397 |
Symbol | mreC |
ID | 4201571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2667598 |
End bp | 2668449 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638083262 |
Product | rod shape-determining protein MreC |
Protein accession | YP_696820 |
Protein GI | 110801264 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTCT TCAAGAATAA ACTGGCAGTA ACTGTTATAG TACTGTCAGT TGCCTTTTTA GGAATAATTA TATTTACTGT TAAGAGTGAT TCTAAAAATC CAATTTCAGG TGGAGTTGGT ACTGTTTTAA ACCCTGTGCA GAAGGTTGTA TACACAATAA GTGATAAAGT TCATGATGTC TTTGATTTCT TCTATAACTT TTCAGATGTT AAGAATGAAA ATAATGATTT AAAAAAGAAA AATTTAGAAT TAGAAAATCA ATTAGTTGAA TACAATGAGT TAAAGCGTCA AAATGATGTT TTAAGAGGAA TAGTTGATTT TTCTAAGGAA AATAATCAAT ATAAATATAT CGGTACAAAC ATAATAGGAA AAAGCGGAAA TAGCTTTGTA GAAGGTTACA CTATTGATAA AGGATCAAGT GAAGGGATTA AAAAAGATTA CATAGTGATT TCTCCAGAAG GATTAGTGGG AGTTGTAACA GAAGTTCACT CAAACTGGTC AAAAATACAG ACTTTATTAA ATGAAAACGT AGCTGTTGCA GCAACTATTG AAGGAGATAG CAATTCAGGA GACGGAATAG TTAAAGGATA TAGAAATGGT AGTGAGATGC AAGCAGAGAT AACTAACTTA CCTATGAATT CTACAATAAA AGAAGGTGAG ACAGTAGTTA CTTCAGGCCT TGGAGGATAT TATCCTAAAG GAATAAGAAT TGGTGAAGTA ACATCAGTAC AATCAGATGA TGTTAAAGTT ATGAAAACCG CTATATTAAA AACATATGTT GATTTTAATA ATTTACAAGA ATTATTTGTA GTTGTACCAC CATCAGAGAG AGATGGTATA GTTAAGTATT AG
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Protein sequence | MKFFKNKLAV TVIVLSVAFL GIIIFTVKSD SKNPISGGVG TVLNPVQKVV YTISDKVHDV FDFFYNFSDV KNENNDLKKK NLELENQLVE YNELKRQNDV LRGIVDFSKE NNQYKYIGTN IIGKSGNSFV EGYTIDKGSS EGIKKDYIVI SPEGLVGVVT EVHSNWSKIQ TLLNENVAVA ATIEGDSNSG DGIVKGYRNG SEMQAEITNL PMNSTIKEGE TVVTSGLGGY YPKGIRIGEV TSVQSDDVKV MKTAILKTYV DFNNLQELFV VVPPSERDGI VKY
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