Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2349 |
Symbol | |
ID | 4202511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2614061 |
End bp | 2614798 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638083214 |
Product | amino acid ABC transporter, ATP-binding protein |
Protein accession | YP_696772 |
Protein GI | 110799645 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.271296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAGG TTAAAAATCT TAAAAAGAGT TATAAAAATT TAGAAGTTTT AAAAGATGTT AACATGGAAG TTAAACAAGG TGAGGTAGTT GTTATAATAG GACCTTCAGG TTCAGGTAAG TCAACTTTCC TAAGATGTTT AAATTATTTA GAATCACCAG ATAAGGGAGA AATCCAAGTT GGTCATGTGA AAGTAAATGC TGAAAAAATA AGTAAAAAAG AAATTAATGA CTTAAGAAAA CAATCAGCAA TGGTATTTCA GCATTATAAT TTATTCAACA ACAAAACAGT TCTACAAAAT GTTACGGAAG CATTGATTGT AGTAGAAAAA ATGGATAAGA AAAAGGCAGA AGAAATTGCC TTAGAAAATT TAAAGAAGGT AGGTATGGTT GATAAAAAGG ATAATTATCC AAATACCTTA TCAGGAGGAC AAAAACAAAG GGTTAGTATA GCGAGAGCTA TGGCTATAAA TCCCAATGTT ACCCTTTTTG ATGAACCTAC ATCAGCCTTA GATCCAGAAT TGGTAGCAGA AGTATTAGCT GTTATAAAAG ATTTAGCTAA GGAACATAAA ACAATGATAA TAGTTACCCA TGAAATGAGT TTTGCAAGGG ATGTAGCAGA TAGAGTTGTA TTTATGGATG GAGGAATAGT TTTAGAAGAA GGTACTCCAG AGGAAATTTT TAAAAATCCT AAAAATGAAA GAACAAAACA GTTTCTTGAA AGATTTATAG TTAATTAA
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Protein sequence | MIKVKNLKKS YKNLEVLKDV NMEVKQGEVV VIIGPSGSGK STFLRCLNYL ESPDKGEIQV GHVKVNAEKI SKKEINDLRK QSAMVFQHYN LFNNKTVLQN VTEALIVVEK MDKKKAEEIA LENLKKVGMV DKKDNYPNTL SGGQKQRVSI ARAMAINPNV TLFDEPTSAL DPELVAEVLA VIKDLAKEHK TMIIVTHEMS FARDVADRVV FMDGGIVLEE GTPEEIFKNP KNERTKQFLE RFIVN
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