Gene CPF_2349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2349 
Symbol 
ID4202511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2614061 
End bp2614798 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content30% 
IMG OID638083214 
Productamino acid ABC transporter, ATP-binding protein 
Protein accessionYP_696772 
Protein GI110799645 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.271296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAGG TTAAAAATCT TAAAAAGAGT TATAAAAATT TAGAAGTTTT AAAAGATGTT 
AACATGGAAG TTAAACAAGG TGAGGTAGTT GTTATAATAG GACCTTCAGG TTCAGGTAAG
TCAACTTTCC TAAGATGTTT AAATTATTTA GAATCACCAG ATAAGGGAGA AATCCAAGTT
GGTCATGTGA AAGTAAATGC TGAAAAAATA AGTAAAAAAG AAATTAATGA CTTAAGAAAA
CAATCAGCAA TGGTATTTCA GCATTATAAT TTATTCAACA ACAAAACAGT TCTACAAAAT
GTTACGGAAG CATTGATTGT AGTAGAAAAA ATGGATAAGA AAAAGGCAGA AGAAATTGCC
TTAGAAAATT TAAAGAAGGT AGGTATGGTT GATAAAAAGG ATAATTATCC AAATACCTTA
TCAGGAGGAC AAAAACAAAG GGTTAGTATA GCGAGAGCTA TGGCTATAAA TCCCAATGTT
ACCCTTTTTG ATGAACCTAC ATCAGCCTTA GATCCAGAAT TGGTAGCAGA AGTATTAGCT
GTTATAAAAG ATTTAGCTAA GGAACATAAA ACAATGATAA TAGTTACCCA TGAAATGAGT
TTTGCAAGGG ATGTAGCAGA TAGAGTTGTA TTTATGGATG GAGGAATAGT TTTAGAAGAA
GGTACTCCAG AGGAAATTTT TAAAAATCCT AAAAATGAAA GAACAAAACA GTTTCTTGAA
AGATTTATAG TTAATTAA
 
Protein sequence
MIKVKNLKKS YKNLEVLKDV NMEVKQGEVV VIIGPSGSGK STFLRCLNYL ESPDKGEIQV 
GHVKVNAEKI SKKEINDLRK QSAMVFQHYN LFNNKTVLQN VTEALIVVEK MDKKKAEEIA
LENLKKVGMV DKKDNYPNTL SGGQKQRVSI ARAMAINPNV TLFDEPTSAL DPELVAEVLA
VIKDLAKEHK TMIIVTHEMS FARDVADRVV FMDGGIVLEE GTPEEIFKNP KNERTKQFLE
RFIVN