Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2345 |
Symbol | |
ID | 4201025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2609104 |
End bp | 2610840 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 638083210 |
Product | sensor histidine kinase |
Protein accession | YP_696768 |
Protein GI | 110801165 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2972] Predicted signal transduction protein with a C-terminal ATPase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0123193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTTA GTAAGTCAAA TCTTTATAAG AGACTGTTTA TAACATATAC AATAGTTATA TTATCCGTAG TTAGTATTTT ATGCATTTAC TTTTTAAGTA AAACTTCTGA AGAGATTAAG AGAAATAATC TTTATTTAAA TGATAAAATA CTTCAAGATG TAAATGAAAC CCTAGAGTAT AATAGCAGCA CATCGAGAAG AATAATGAAT ATGCTCTATG AAGATGACTT TAGGTTAAAT GATGTTATAA AGTATTTAAA TTCAGATTTA GTTGATTATA TAAAAGGCAA ATTAGATTAC TATAGTGCAA GTGATAAACT TTATTATAAT GGTATAGAAA GTTTTGTTAA GAGTTCATTT CAATTAAACA ACTTTTTAAA AAGTATATCC TTTATAAGTT ATTCTAGAAA TGAAATATCA GTTTTTAATA GAAAGGGAGA AATAAAGACA TATCCTTTTA ATTCAAATGA ATTATTAGAC AAAAAGGATA TTGAATATGC AATCTACAAT AAAAATGAGA TTAGTATAAT AAATGAAATA AGAGATGCAG CTTCTTTAAA GCCAGAAGGA ATGCTTATGA CTACTTACGA TGTAGGGGTA ATTAGTGATG TTATAAAAAA ATATAAGGAT ACAAATTCAG AGGTTCTTAT ATTAAATAAA GAAGGAATGG TTTTATATGA CTCAGAAAAT AAATATGATT ATGAGTATTA TCCATACTTT GATAAGCTTA AAGTAGGGCG TCATGAGATT TTATTAGAAG ATAGTTATTA TGTAGATATA TTACCAGATA ACAATGGATT AATGTCTGTA GTAAGAATAA AAGTAAGCAA TGCTACTAAA GTACCTCTTC TTTTTAAAGT TTCAGCATTC TTAGTTAGTT TATTCTTATT TATAATTGCA GAGTGTGTTC TTTATATAAA ATTTAAAAAT TTAAGTAGTA GAATGGATTC CCTTGTTTTA GCCATGGAAA AGGTTGAAAA AGGAGATATA GATGTTCATA TTCCTTTAAG TAAGGATAGA GATGAAATAA CATTTATTGC AGATAATTTT AATAAAATGT GTGAAAAGTT AAATGATCAT ATAAGGAAGA GCTACTTAGC AGAATTACGT CAAAGAGAGG CTGAAATTGT AGCCCTTCAA AATCAAATTA ATCCACATTT TCTTTATAAT ACACTAGAGT CAATAAGGAT GAAGGCAATA TGTAATGGAG ATAAAGAAGT AGGAAAAATG CTTTATAGCT TAGCATTTTT ATTTAGAAGC CAAGTAAAAG GAAATCTTAT AGTTTCAATA GATCAGGAAA TAAAATACTG TAATAAATAT TTAGAGTTAT TTAAGTTTAG ATATGATGAG AAATTTAAGT TCAAAATAGA ATGTGAAGAG GATTTATATG ATAAGGGAAT TGTTAAATTT ACTCTTCAAC CTTTAATTGA AAACTATTTT GTTCATGGTA TAAGGTTAGA AAGAGATGAT AATGAATTAA AGATATATAT CTATAAACAT TTAGAAGATA TAGTTGTGGA AGTAATAGAC AATGGTAGGG GAATTCCTAA GGAGAAATTA GATGATATAA ATAGAAGAAT TAGGGAATGT GATCATTCTG GTAAATCAAT AGGGATGCTA AATGTTCATG AAAGGATTAA AATTAAATAT GGGGAACCTT ATGGGTTAAC TGTTACTAGT GAGGAGAATA AGGGAACTAA TATGATTTTA AAATTCCCGC TTAGAGAGGT GGAGTAG
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Protein sequence | MKFSKSNLYK RLFITYTIVI LSVVSILCIY FLSKTSEEIK RNNLYLNDKI LQDVNETLEY NSSTSRRIMN MLYEDDFRLN DVIKYLNSDL VDYIKGKLDY YSASDKLYYN GIESFVKSSF QLNNFLKSIS FISYSRNEIS VFNRKGEIKT YPFNSNELLD KKDIEYAIYN KNEISIINEI RDAASLKPEG MLMTTYDVGV ISDVIKKYKD TNSEVLILNK EGMVLYDSEN KYDYEYYPYF DKLKVGRHEI LLEDSYYVDI LPDNNGLMSV VRIKVSNATK VPLLFKVSAF LVSLFLFIIA ECVLYIKFKN LSSRMDSLVL AMEKVEKGDI DVHIPLSKDR DEITFIADNF NKMCEKLNDH IRKSYLAELR QREAEIVALQ NQINPHFLYN TLESIRMKAI CNGDKEVGKM LYSLAFLFRS QVKGNLIVSI DQEIKYCNKY LELFKFRYDE KFKFKIECEE DLYDKGIVKF TLQPLIENYF VHGIRLERDD NELKIYIYKH LEDIVVEVID NGRGIPKEKL DDINRRIREC DHSGKSIGML NVHERIKIKY GEPYGLTVTS EENKGTNMIL KFPLREVE
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