Gene CPF_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2280 
SymbolrpsU 
ID4203347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2529158 
End bp2529334 
Gene Length177 bp 
Protein Length58 aa 
Translation table11 
GC content34% 
IMG OID638083145 
Product30S ribosomal protein S21 
Protein accessionYP_696703 
Protein GI110800958 
COG category 
COG ID 
TIGRFAM ID[TIGR00030] ribosomal protein S21 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAA TCAGAGTAAA AGAAAACGAA TCATTAGAGC AAGCATTAAG AAGATTTAAG 
AGACAATGCG CTAGAGCTGG AGTTCTTTCA GAAGTAAGAA AAAGAGAACA CTACGAAAAG
CCAAGCGTAA AGAGAAAGAA AAAATCAGAA GCTGCAAGAA AGAGAAAATT CAAATAG
 
Protein sequence
MSEIRVKENE SLEQALRRFK RQCARAGVLS EVRKREHYEK PSVKRKKKSE AARKRKFK