| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2232 |
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| Symbol | |
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| ID | 4203389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2478231 |
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| End bp | 2478875 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638083097 |
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| Product | pyrophosphatase PpaX |
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| Protein accession | YP_696656 |
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| Protein GI | 110799705 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAG CAGTATTGTT TGACCTAGAT GGAACATTGA TAAATACTAA TGATTTAATA
CTAAAATCAT TTAAACATAC ATTTAAAACT ATGTTAGATT TAGAGCCAAG TGAAGAAGAG
ATTACTATGA ACTATGGTAG ACCATTGCAG GAAATTTTTA AATCCTATGA TGAAAATAGA
ATAGAAGAAA TGATTAATTG TTATAGAAAA ATAAACTTAG AATTACATGA TGATGAATGT
AAAGAGTTTG CTGGAGTCGA TTTAATGCTA AAAACATTAA AGAGTAAAGG AATTAAAATT
GGAGTTGTAA CTTCAAAGAA AAGTGATATG GCAGAGCGTG GTGCTAAACT AATGGGTATA
TTTAAGTATT TTGATACTTT TATAACTCCT GAAATTACTA CAAAGCATAA GCCAGATGGG
GAGCCAGTTT TAAAGGCTTG TGAAAATTTA GGAGTATCTC CTAGTGAAGC TCTTATGGTA
GGTGATTCAC CTTACGATAT TTTAGCAGGT AAAAATGCTG GGGCTAAGAC CTGTGGAGTT
AAATACACAG CATTGCCTCT TGAAAAATTA GGAGAGAGTG AGCCAGAATT TTATGTAGAT
AAACCTTTAG AAATTTTAGA TCTTGTTGAA AAATTAAATT CTTAA
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| Protein sequence | MIKAVLFDLD GTLINTNDLI LKSFKHTFKT MLDLEPSEEE ITMNYGRPLQ EIFKSYDENR
IEEMINCYRK INLELHDDEC KEFAGVDLML KTLKSKGIKI GVVTSKKSDM AERGAKLMGI
FKYFDTFITP EITTKHKPDG EPVLKACENL GVSPSEALMV GDSPYDILAG KNAGAKTCGV
KYTALPLEKL GESEPEFYVD KPLEILDLVE KLNS
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