| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2218 |
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| Symbol | |
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| ID | 4203594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 2464146 |
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| End bp | 2466638 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638083083 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_696642 |
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| Protein GI | 110800912 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAA GAAAAAGAGA GCATAAAGAT AGAAAGCAGA AGAAAAATTC ACCTAAAAAT
CAATCGAAAG TAACAAAATT TTTGAAATGG TTCTTTATAG GGATTCTGCT TCTAGGGATA
ACTGCCGTAA CAGTAGTTGG AATTTACGTT CTTTCTATTA TACGTTCATC TCCAGAGTTA
GATGTTCAGG CAATTCAATC TCTAAATCAG CCATCCATTC TTTACGATGA TCAGGGAAAC
TTTATGGATA ATGTTATAAC TCGTGAACAA CGTTATGTAG TTAAATCTGA AGAGATACCT
GATAACTTAA AAAAGGCTTT TGTAGCTATT GAAGACGAAA GATTTTATGA GCATAAAGGA
ATAGACATTA AAAGAATTTT TGGGGTAATA GCTTCTAATA TTAAAGGTAA ACTTTCAGGA
AGTAATACGG TTCAAGGGGC TTCAACTATA ACTCAGCAAC TTATAAAAAA TGCCGTACTT
ACTAATGAAG TTAGTTATGA AAGAAAAATT AAAGAAATGT ACTTAGCTTT GGAATTAGAA
AAGCACCTTT CAAAAGATGA AATCCTTACT ACGTATTTAA ATACAATTCC TATGGGTGGA
TACCAATATG GGGTTAGCGC AGCTGCTCAA AGATTTTTTA GTAAGAATGT TTCAGATTTG
AATTTAGTTG AGTGCGCTTA TTTAGGAGGA CTTACTCAAG CACCAACTTC TTATGATGGT
CTTTCAGAGG CAAATAAAGA AAATCCAAGT AGATATTTAA ATAGAACTAA ATCTGTACTA
TTTAAAATGC ATGAACTTGG ATATATTTCA AGTGAACAAT ATAATGACGC AATAAATGAA
ATTGACACAA ATGGTATAAA ATTCACACCA AATAATAAAT TAAGTAAAAC TAACTTTGAG
TGGTTCACAA GACCAGCTAT AACTCAAGTT AAACAAGACT TAATGAATAA ATATAAATAT
ACACAAGAGG AAGTTGACAA ACTTATAGCT AATGGTGGAT TAAAAATCTA TACTTCTATG
GATAGAAATC TTCAAAATAA TGTTCAAAAA GTTTTAGATG ATCCAAATAA CTATAAAGCT
ATAACTAATA ATCCTAATGA AAAAAATGAA GATGGTGTTT ATAAATTACA AGCATCTGCC
ACAATAATAG ACTATAAAAC AGGCCATGTT AAGGCTTTAG TTGGAGGAAG AGGGGAACAA
CCTGCTATGT CTCACAATAG AGCTTATTAT GATTTAAAAT CTATAGGTTC TGCAACAAAA
CCATTAACAG TTTATGGTCC TGCTATTGAT TTAGGACTTG GTGGCGCTGG CTCTGTAGTA
AATGATTCTC CATTAAGTAA TAAAGAATTA TCTTCTACAG GATATAAAGA TCAACCTAAG
AATGAATACA ATAGTTATAG AGGTCCTTTA ACTTTTAGAG AAGCAATTAA AATCTCTAGT
AACTTAGCAG CCATAAAAGT TGCTAACGAA GTAGGTGTTT CAAACTCTAT AGCTTATGGA
GAAAAATTAG GTCTTGTTTA TGGACCTCAT TCTAGAGGTA TTTCCACAAC AGCCTTAGGT
CAATTCCAAA ATGACCCTAA TAATCCTGAT GGAGGAAATA CTTATACTCT AGCTTCAGCC
TTCGGTGTTT TTGGTAATAA CGGTGTTAAA ACAAATGCTA AATTATATAC AAAGGTATTA
GATTCTCATG GAAATGTAAT TCTTGATACA AGTACTCCAG AAGAAACTAA AATATTTAGT
CCTCAAGCGT CTTATATAGT TTATGATATG CTTAAGGATC AAGTAGAAAG TGGCTCTGCA
AAACCTGCTA AATTTGGTAA TATTCCTGTG GCGGGTAAAA CAGGAACTAC CACTGGAGAT
AAAGACTATT TATTTGCAGG ATTAACTCCA TATTATTCTG CGGCTATTTG GATTGGATAT
GATAAGCCTA GAGAAATGAG AACTAGTAGT GGTACTGTTA CCTCTCCTAT TTTCGGAAAA
ATAATGGGCT TAGCTCATAA AGACTTACAG TACAAAGAGG TTGAACAACC TAGTGGAATA
AGCAAGATTG CAGTATGTAT GGATTCTGGT CTTAAACCTA CTTCCCTTTG TACTCAAGAC
CCTAGAGGCA GTAGAGTTTA TTATGATTGG TTTATTAATG GTTCTGCTCC TACTCAATAT
TGTAATTATC ATACAAATTT ACATGTAAAT GCTCCTGATA CAAATGATAA TAATAATTCT
GGAGCAAATG AAGGAAATAA ACAACAAGAA ACTAAACCTG AAGAAGTTAA ACCTAACGAA
AATAATAATA ATAAACCAAA TGAACAAAAT CCAAATAATA AGCCTGATAA TACACCAGCT
AATGGTAATA ATAACACTAA TAATAACGGA GGTGGAAATG TGACTCCTCC TCAAAATCAA
ACAGAAAACA ATACAAATAA TGGAGTTATT ACTCCACCTC AAGCTGGAAA TAACCAAAAT
CAAAACGGTC AAAACAACAA CATTACGCAA TAG
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| Protein sequence | MTERKREHKD RKQKKNSPKN QSKVTKFLKW FFIGILLLGI TAVTVVGIYV LSIIRSSPEL
DVQAIQSLNQ PSILYDDQGN FMDNVITREQ RYVVKSEEIP DNLKKAFVAI EDERFYEHKG
IDIKRIFGVI ASNIKGKLSG SNTVQGASTI TQQLIKNAVL TNEVSYERKI KEMYLALELE
KHLSKDEILT TYLNTIPMGG YQYGVSAAAQ RFFSKNVSDL NLVECAYLGG LTQAPTSYDG
LSEANKENPS RYLNRTKSVL FKMHELGYIS SEQYNDAINE IDTNGIKFTP NNKLSKTNFE
WFTRPAITQV KQDLMNKYKY TQEEVDKLIA NGGLKIYTSM DRNLQNNVQK VLDDPNNYKA
ITNNPNEKNE DGVYKLQASA TIIDYKTGHV KALVGGRGEQ PAMSHNRAYY DLKSIGSATK
PLTVYGPAID LGLGGAGSVV NDSPLSNKEL SSTGYKDQPK NEYNSYRGPL TFREAIKISS
NLAAIKVANE VGVSNSIAYG EKLGLVYGPH SRGISTTALG QFQNDPNNPD GGNTYTLASA
FGVFGNNGVK TNAKLYTKVL DSHGNVILDT STPEETKIFS PQASYIVYDM LKDQVESGSA
KPAKFGNIPV AGKTGTTTGD KDYLFAGLTP YYSAAIWIGY DKPREMRTSS GTVTSPIFGK
IMGLAHKDLQ YKEVEQPSGI SKIAVCMDSG LKPTSLCTQD PRGSRVYYDW FINGSAPTQY
CNYHTNLHVN APDTNDNNNS GANEGNKQQE TKPEEVKPNE NNNNKPNEQN PNNKPDNTPA
NGNNNTNNNG GGNVTPPQNQ TENNTNNGVI TPPQAGNNQN QNGQNNNITQ
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