Gene CPF_2208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2208 
Symbol 
ID4202408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2454036 
End bp2455034 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content26% 
IMG OID638083073 
Producthypothetical protein 
Protein accessionYP_696632 
Protein GI110800103 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.797475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGCT TAAATGGAAA TTTAATAAGA ATCTCTGGAG AATTGTTGAA AATAACATTA 
AATAAAGAAG TTACTGGAAC TTTATATTAC TTTGAGAAAC TTAATGGAGA GTTAAAGTTT
ATTAAACATA TAGAAAAAGA AAATGAATTT GAATTTAAGG ATCCAGAGCC TAAGAATAGA
ACTTTTTATT TTATAAAATG TGAAAATGAA GAGTTGATTT TAGCAGAGAG ACTTGTACCG
CTTAAAAGAT TTTGCAATTT TAGAGATTTA GGTGGATATG AAACAAAAGA TGGAAGAAAG
GTTAAATGGG GATTATTCTA TCGCTCAGAA GCTTTAAATA AATTAAAAGG AGAAGATTTA
GAATATTTTA AAACCCTAGG AATTAAATAT ATTTTTGACT ATAGATCCTT AGAAGAAGTT
AAATTAAGCC CAGATAGAAA TGTTGAGGGA ACAAAAAATA TAAATATATC TGCAATGAGA
AATTTAGATA ATCAAAATCT AAATATGGAA TCCTATTTAA AAGGAATTTT ATCAAAGGAT
AGCAATCAAG AACTTCCTGA AAAGATACTT ATGGATGGAT ATAGTGAGAT GCCATTAAAT
AATTTAGCTT TTAAGGAGCT TATAAAGATA ATAGAAAATC CTAAAAACCT AGCTGTATTA
CAGCATTGTA CATCAGGAAA AGATAGAACA GGTTTAGGAT CAGCCTTAAT ATTATTGCTT
TTAGGTGTGC CAGAGCAAAA GGTAATAGAA GATTATATGT TAAGTAATGA ATATAGAAAA
GGGGAGAATC ATAGAATACT TCAAATTTAT GAAAAGCATG TATCAAATGA AACCATAAAG
GAATTAATAG AGGGGATTTT AGGAGTAAAA AAGAAATTTA TAGAACTTAG TTTAAATAAG
ATAAAAGATA CTTATGGTAG CTATGAAACA TATTTTTTTA AAGAATACGG ATTAACTAAG
GAAAAAATAG AGTTTTTAAG AAATGAATAT TTATATTAG
 
Protein sequence
MRSLNGNLIR ISGELLKITL NKEVTGTLYY FEKLNGELKF IKHIEKENEF EFKDPEPKNR 
TFYFIKCENE ELILAERLVP LKRFCNFRDL GGYETKDGRK VKWGLFYRSE ALNKLKGEDL
EYFKTLGIKY IFDYRSLEEV KLSPDRNVEG TKNINISAMR NLDNQNLNME SYLKGILSKD
SNQELPEKIL MDGYSEMPLN NLAFKELIKI IENPKNLAVL QHCTSGKDRT GLGSALILLL
LGVPEQKVIE DYMLSNEYRK GENHRILQIY EKHVSNETIK ELIEGILGVK KKFIELSLNK
IKDTYGSYET YFFKEYGLTK EKIEFLRNEY LY