Gene CPF_2200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2200 
SymbolyajC 
ID4202855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2441045 
End bp2441314 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content27% 
IMG OID638083065 
Productpreprotein translocase subunit YajC 
Protein accessionYP_696624 
Protein GI110801086 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTC AACAAATAGC AACAATGGTA TTACCTTTTA TTTTAATGTT TGGTGTATTT 
TATTTCTTAC TTATCTTACC AGAAAAGAAA AGAAAGAAAA AATATGATGC TATGATAGAT
GAGCTAAAAG TAAATGATAA GATCATAACT AGAGGCGGAA TCATAGGTAG AATAGTAAAA
TTAAAAGATG ATAGCGTTAT AATAGAGACT ACTCAAGATA GAACAAAGAT CGAGTTTTCA
AAACAAGGCA TAAGTTCAAA GATTGATTAG
 
Protein sequence
MNFQQIATMV LPFILMFGVF YFLLILPEKK RKKKYDAMID ELKVNDKIIT RGGIIGRIVK 
LKDDSVIIET TQDRTKIEFS KQGISSKID