Gene CPF_2172 details

Gene Information

• Locus tag: CPF_2172
• ID: 4201366
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 2408634
• End bp: 2409128
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 638083037
• Product: hypothetical protein
• Protein accession: YP_696596
• Protein GI: 110801021
• COG category: [S] Function unknown
• COG ID: [COG3542] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.556394
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCATT CAGCTGAATA TTTTATAAAA TCATTAAATA TGACAGCACA TCCTGAAGGT 
GGATATTTTA AAGAATCCTT TATTTCACCT AGCAAACTTG CTCCAAATAC TTTACATATA 
AATGAAGAGC GTTTACTTTG GACTAGCATA TATTTCTTAT TAAGAACTGG AGAAGTTTCA 
AATTTTCATA GATTAAAATC TGATGAAATG TGGTATTTCC ACGCTGGAGA ATCCTTAACA 
ATTTATATGA TAAGCCCTGA TGGTGAACTT ATAGAAAAAC AACTAGGATT AAACATAGAA 
AAAGGAGAAA CTCCTCAAGT TTTAGTTCCT AAGGATTATA TATTTGGTTC TGCTATGAAT 
AATGAAGGCT TCTCCCTAGT TGGTTGTATG GTAGCACCTG GCTTTGATTT TAAAGACTTT 
GAACTATTTG AAAGAGAAGA TTTGCTTGAA AAATATCCAA ACTATAGAGA AGTAATAGAA 
AAATTAACTA GATAA 

 

Protein sequence

MNHSAEYFIK SLNMTAHPEG GYFKESFISP SKLAPNTLHI NEERLLWTSI YFLLRTGEVS 
NFHRLKSDEM WYFHAGESLT IYMISPDGEL IEKQLGLNIE KGETPQVLVP KDYIFGSAMN 
NEGFSLVGCM VAPGFDFKDF ELFEREDLLE KYPNYREVIE KLTR