Gene CPF_2166 details

Gene Information

• Locus tag: CPF_2166
• ID: 4202092
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 2402861
• End bp: 2403517
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 638083031
• Product: single-stranded DNA-binding protein
• Protein accession: YP_696590
• Protein GI: 110800328
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000000374562
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAATT TAATGTTAAA CAACAAAATT TATTTAGAAG GAACTGTAGT TTCAGAATTA 
GAGTTCAGTC ACGAGATGTA TGGAGAGGGT TTCTATACAT TTAACTTAGA GGTTATGAGA 
TTAAGTGATT CAAAGGACTT ATTAAATATT ACTGTATCAG AAAGATTAAT AACCACTATG 
GATTTAAAAA TTGGAACTGA AATAGTAGTT GAAGGACAAT TAAGAAGTTA CAACAAATTT 
ATAGATGGAA ATAATAAGCT TATCTTAACA GTTTTTGCAA GAAATATAGA ATACTGTGAA 
GAAAGAAGTA AAAATCCTAA TGAGATTTTC TTAGATGGAT TTATTTGTAA GGAGCCAGTT 
TATAGAACAA CTCCATTTGG AAGAGAAATT GCTGACTTAT TATTAGCTGT AAATAGATCT 
TATAATAAAT CAGATTATAT CCCAACTATA GCATGGGGAA GAAACTCAAG ATTCTGTAAA 
ACATTAGAAG TAGGGGATAA TATAAGAATT TGGGGAAGAC TTCAAAGTAG AGAATATCAA 
AAGAAAATAT CTGAAACTGA AGTTGTTAAG AAAATAGCAT ATGAGGTTTC AATTTCTAAA 
ATGGAAAAAG TATCTGTTGA ATCAGAACAA AATGAATCAG GTGAAGAAAT TTCTTAA 

 

Protein sequence

MDNLMLNNKI YLEGTVVSEL EFSHEMYGEG FYTFNLEVMR LSDSKDLLNI TVSERLITTM 
DLKIGTEIVV EGQLRSYNKF IDGNNKLILT VFARNIEYCE ERSKNPNEIF LDGFICKEPV 
YRTTPFGREI ADLLLAVNRS YNKSDYIPTI AWGRNSRFCK TLEVGDNIRI WGRLQSREYQ 
KKISETEVVK KIAYEVSISK MEKVSVESEQ NESGEEIS