Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2146 |
Symbol | infC |
ID | 4203440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2388674 |
End bp | 2389195 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638083011 |
Product | translation initiation factor IF-3 |
Protein accession | YP_696574 |
Protein GI | 110799853 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000692224 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACAAGA TTAGTAAAAA TTTTGCAATC AATCAAGAAA TAAGAGAAAA AGAGGTTAGA TTAATTTCTA GCACAGGAGA GCAACTTGGT GTTGTATCAG GAAGAGATGC ACAAAAAATG GCAGATGAGG CTGAGTTAGA CTTAGTTATG ATTTCGCCAA ATGCTAAACC ACCAGTTTGC AAAATAATGG ATTACGGTAA ATTTATTTAC GAGCAATCTA AAAAAGAAAA AGAAGCAAAA AAGAAGCAAA AGGTTATCAG TGTTAAGGAG ATAAGAGTTA GCCCAACTAT AGAAAAGCAT GACTTAGAAA TAAAAGCTAA GAATGCTAAA AAATTCTTAG AAGCTGGAGA TAAAGTCAAG ATAACTGTAA GATTTAGAGG AAGAGAAGCT GAGCATTCAC ATGTTGGTGT TAAGATATTA GATAGTTTCT TAGCTCAATT AGAGGAAGTA TGTTCAGTAG AAAAACCTGC TAAATTAGAA GGTAGAAACA TGATAATGAT TTTAGCTCCT AAAAAAGCGT AA
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Protein sequence | MNKISKNFAI NQEIREKEVR LISSTGEQLG VVSGRDAQKM ADEAELDLVM ISPNAKPPVC KIMDYGKFIY EQSKKEKEAK KKQKVISVKE IRVSPTIEKH DLEIKAKNAK KFLEAGDKVK ITVRFRGREA EHSHVGVKIL DSFLAQLEEV CSVEKPAKLE GRNMIMILAP KKA
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