Gene CPF_2146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2146 
SymbolinfC 
ID4203440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2388674 
End bp2389195 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content33% 
IMG OID638083011 
Producttranslation initiation factor IF-3 
Protein accessionYP_696574 
Protein GI110799853 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000692224 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACAAGA TTAGTAAAAA TTTTGCAATC AATCAAGAAA TAAGAGAAAA AGAGGTTAGA 
TTAATTTCTA GCACAGGAGA GCAACTTGGT GTTGTATCAG GAAGAGATGC ACAAAAAATG
GCAGATGAGG CTGAGTTAGA CTTAGTTATG ATTTCGCCAA ATGCTAAACC ACCAGTTTGC
AAAATAATGG ATTACGGTAA ATTTATTTAC GAGCAATCTA AAAAAGAAAA AGAAGCAAAA
AAGAAGCAAA AGGTTATCAG TGTTAAGGAG ATAAGAGTTA GCCCAACTAT AGAAAAGCAT
GACTTAGAAA TAAAAGCTAA GAATGCTAAA AAATTCTTAG AAGCTGGAGA TAAAGTCAAG
ATAACTGTAA GATTTAGAGG AAGAGAAGCT GAGCATTCAC ATGTTGGTGT TAAGATATTA
GATAGTTTCT TAGCTCAATT AGAGGAAGTA TGTTCAGTAG AAAAACCTGC TAAATTAGAA
GGTAGAAACA TGATAATGAT TTTAGCTCCT AAAAAAGCGT AA
 
Protein sequence
MNKISKNFAI NQEIREKEVR LISSTGEQLG VVSGRDAQKM ADEAELDLVM ISPNAKPPVC 
KIMDYGKFIY EQSKKEKEAK KKQKVISVKE IRVSPTIEKH DLEIKAKNAK KFLEAGDKVK
ITVRFRGREA EHSHVGVKIL DSFLAQLEEV CSVEKPAKLE GRNMIMILAP KKA