Gene CPF_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2125 
Symbol 
ID4203224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2356082 
End bp2356798 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content29% 
IMG OID638082990 
ProductWecB/TagA/CpsF family glycosyl transferase 
Protein accessionYP_696553 
Protein GI110801341 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1922] Teichoic acid biosynthesis proteins 
TIGRFAM ID[TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000472054 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAGG AGTTATTAGG ATATAAAATA TTTTCAGATA ATAAAGAGGA ACTTTTAAAA 
GAGATTGAAA ATAAAAAAAG AGTTAACATA ATATCTGGAA ATCCAGAGGT TTTATATAAT
GGTATAAAGA ATGAATTTTT AAGAAATAGC TTTACTAAAG AGGATGCTTT AATAATTCCA
GATGGAGTAG GAACTTTGCT TGCAGCTAAG ATTAATGGAA TAGATATTAC AGAAAAAATA
GCTGGAATTG AAGTTATGAA TATGCTTTTA GAGGAAGCTA GAGATAAGAA TTTAAAAGTG
TTTTTATTAG GAGCTAAGGA AGAGACACTA ATTAAATGCA AGGAAAAAAT AAAAGAAAGC
TATGATGGAA TTAATATAGT TGGAAGTAAT AATGGCTTTT TTGATTTAGA CAATTGTGAT
GATTTAATAG AAAAAATTAA TGAAAGCAAG GCTGATATAC TTTTTGTTGC CATGGGAGCG
CCTAGACAAG AAGTCTTTAT AGAAAAATAT AAGGATAAAC TTTGTTGTAA GATTTTTATG
GGTGTTGGTG GAAGTTTTGA TGTGTTTGCT GGAAATGTAA ATAGAGCACC ACAATTTATG
ATTAACATAG GTATGGAGTG GCTTTATAGA GTAGCTAAAG AGCCTTGGAG AATAAAAAGA
TTAGGTAGCA TACCAAAGTT CTTAGTTTTA TCACTTAAGG AAAGAGGTAA AAGATAA
 
Protein sequence
MYKELLGYKI FSDNKEELLK EIENKKRVNI ISGNPEVLYN GIKNEFLRNS FTKEDALIIP 
DGVGTLLAAK INGIDITEKI AGIEVMNMLL EEARDKNLKV FLLGAKEETL IKCKEKIKES
YDGINIVGSN NGFFDLDNCD DLIEKINESK ADILFVAMGA PRQEVFIEKY KDKLCCKIFM
GVGGSFDVFA GNVNRAPQFM INIGMEWLYR VAKEPWRIKR LGSIPKFLVL SLKERGKR