Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2108 |
Symbol | |
ID | 4201468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2338929 |
End bp | 2339588 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 638082973 |
Product | hypothetical protein |
Protein accession | YP_696537 |
Protein GI | 110798840 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000109011 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATATAA AAGAAAATTT AACAAAATTT ACAGAAAAAA TTCCAAGTAA CGTTCAACTT ATTGCTGTAT CTAAAACAAG AACTATTGAA GAAATGGAAG AGGCCTATGA ATTTGGTATT AGAAAATTTG GTGAAAATAA GGTTCAAGAA ATAATAAGAA AATTTGATGA GTTTCACCAA GATGTAGAAT GGCATTTAAT AGGACATCTT CAAACTAATA AGGTGAAGTA TATAGTTGAT AAAGTTCATC TTATACAATC ATTAGATAGT ATTAAATTAT TAAAAGAAAT AGAAAAGGTA TATGGTAAAC ATAATAAAAT TGCCAATACT TTAATTCAAG TTAACATAGG AAGAGAAGAA CAAAAGTATG GTATCTTGGA AGAAGAGTTA GATGAACTTA TAGAAGCTAT AGAAGCTTGT AACAATGTTA ATGTTTTAGG TATTATGACT ATAATTCCAA AGGGAACAGA AGAAGAATGT AGAAAGTACT TTAGCAAAAC TCATAAGCTT TTTTGTGAAT TAAAAGAGAA AAAGTTTAAG AATATAAAAA TGGATATACT TTCAATGGGA ATGTCAGGTG ATTATGAGAT TGCTATTGAA GAAGGCAGCA ATATGGTTAG AATTGGCCAA GGAATTTTTG GCAAAAGATT ATATAAATAA
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Protein sequence | MDIKENLTKF TEKIPSNVQL IAVSKTRTIE EMEEAYEFGI RKFGENKVQE IIRKFDEFHQ DVEWHLIGHL QTNKVKYIVD KVHLIQSLDS IKLLKEIEKV YGKHNKIANT LIQVNIGREE QKYGILEEEL DELIEAIEAC NNVNVLGIMT IIPKGTEEEC RKYFSKTHKL FCELKEKKFK NIKMDILSMG MSGDYEIAIE EGSNMVRIGQ GIFGKRLYK
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