Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2069 |
Symbol | recN |
ID | 4203944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2308324 |
End bp | 2310021 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 638082934 |
Product | DNA repair protein RecN |
Protein accession | YP_696498 |
Protein GI | 110800023 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0497] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTTAC AATTAACTAT AAATAACTTT GCTTTGATAG AAAAAGCATC TTTAGATTTT AAAGAAGGAT TCACTATTTT ATCAGGAGAA ACTGGAGCTG GTAAGTCTAT TCTTATAGAT GCGATAAATT ATGTTCAAGG AAGTAAGTTT AACAAGGACT TAATTAGAAC TGGAGAAGAA AAGACTTTTG TAGAGGCTAT ATTTTCAATA GATGATAATG AGAGGCTTAA AGAAATTTTA GATGATTTAG AAATAGAGTA TGATGATACT TTAATAATTT CTAGAGAAAC TTTTATAAAC GGTAGAAGTA ATATAAAGGT TAATGGAAGA AGTATAATAG TAGCTACTTT AAAAAAAATA AGTAGCACAC TTCTAGACAT ACATGGTCAA CATAACAATC AAAATTTATT AAATAAAGAA AATCATATAA TGTATTTAGA TGATTTTGGA GATTCTAAGT TAAGTGAAGA TTTAAAAGAA TATGGAGAAA AATTCTCAGA GCTTAAGGAT ATAGAAAGAA AAATAAGTGA ATTAAGCAAT GAAGGAAAAG ATGAAAAACT TTTAAATTAT TTAGAATATC AGTTAAATGA AATTGAAGAA GCCAAGCTTA GAAATGGTGA AGAAGAAGAG TTAACAGAAA GATTTAATGT TTTATCTAAT GCAGAAAAAA TAAAAAATTC ACTGGGAATA TCATATAATC TATTAAATGG TATTGAAAGC AGTGTAGTGG ATTCTTTATC AGTAGTAAAT AGGGAGCTTT CAAATGTTGA AGAGCATTTA GAAAAAATCA AAAATATAAA CTCTAAAATA ATGGAAATGT ACTATGAAAT ACAAGAAATG GCTAGAGAAA TTAGGGATAT ATGTGATGAA AGTGTTTATG ATGGCAATGA ATTAGAAGAA ATAAATAGCC GTATGTTTAA GATTGCTGCA TTAAAGAAGA AGTATGGAAA TAGTATAGCC GAAATCTTAG AATATAAAAA TAATATTTTA TCTCAAATAA ATAATATTAA AAACTCAGAA AAAATAATTG AAGATCTTTT AAATGAAAAA AGTAAAGTTG AGAATGTTTT AAGTGAAATA GCTAATAGAA TTCATAATAA GAGAATAGAA CTTTCAAAAG TTTTAGAAGA AAATATCCAT AAAGAACTGG CCTATGTTGG CTTAGGAAAA TGTAGATTTG AAGTTCTTAT TGAGGAAGAT GAAACCTTTA ACTTTAAAGG TAAGGACAAA GTACAATTTC TTATATCAAC AAATCCTGGT GAACCATTAA AGCCTATGGA AAGAATAGTT TCTGGAGGAG AACTTTCAAG AATAATGTTA GCTTTAAAAG CTGTGTTTAT AGATAAGGAT AAGATTCCTA CAGTTATATT TGATGAAATA GACACCGGTA TAAGTGGAAG AGTAGCTCAA TCCGTTGGAG AAAAGATGTA TGAAATATCA ACAAAACATC AAGTTTTTTG TATCACACAT CTTCCTCAAA TAGCAAGTAT GTCGGACAAT CATTATATGG TTAGAAAAAA AGTAATAGAT AATAAAACTT TTTCAAAGGT TGAACCTATA ACTTATAATC AAAAAATTGA AGAGGTTGGA AAAATGCTAG GTGGCGTTGA AATGACAAGT AATACATTAT TAAATGCTAA AGAGATGATA GAGCTAGCTG ATACAAAAAA AGAAACAATT AAGACTTTTC ATACATAA
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Protein sequence | MLLQLTINNF ALIEKASLDF KEGFTILSGE TGAGKSILID AINYVQGSKF NKDLIRTGEE KTFVEAIFSI DDNERLKEIL DDLEIEYDDT LIISRETFIN GRSNIKVNGR SIIVATLKKI SSTLLDIHGQ HNNQNLLNKE NHIMYLDDFG DSKLSEDLKE YGEKFSELKD IERKISELSN EGKDEKLLNY LEYQLNEIEE AKLRNGEEEE LTERFNVLSN AEKIKNSLGI SYNLLNGIES SVVDSLSVVN RELSNVEEHL EKIKNINSKI MEMYYEIQEM AREIRDICDE SVYDGNELEE INSRMFKIAA LKKKYGNSIA EILEYKNNIL SQINNIKNSE KIIEDLLNEK SKVENVLSEI ANRIHNKRIE LSKVLEENIH KELAYVGLGK CRFEVLIEED ETFNFKGKDK VQFLISTNPG EPLKPMERIV SGGELSRIML ALKAVFIDKD KIPTVIFDEI DTGISGRVAQ SVGEKMYEIS TKHQVFCITH LPQIASMSDN HYMVRKKVID NKTFSKVEPI TYNQKIEEVG KMLGGVEMTS NTLLNAKEMI ELADTKKETI KTFHT
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