Gene CPF_2058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2058 
Symbol 
ID4201043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2297980 
End bp2298399 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content33% 
IMG OID638082923 
Producthypothetical protein 
Protein accessionYP_696487 
Protein GI110799075 
COG category[S] Function unknown 
COG ID[COG3874] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02874] sporulation protein YtfJ 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.836973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAACT CAAATCACCC AATAGAAAAT CTAATGGGTA CAACAATGGA AAACATAAGA 
GACATGATAG ATGTTAATAC TGTAGTTGGA GATGCCATAG AAACTAGAGA TGGAAGTTAC
ATAATTCCAA TATCAAAAGT TTCCTTTGGA TTTGCTTCGG GAGGCTCAGA ACTTCCAAAT
AAAGAATGTG AAAAAATAGA TGATAGATTT GCCTTTGGTG GGGGCTCTGG CGCTGGTGTT
AGTGTAAAGC CAGTTGCTTT CTTAGTTCTT AAAGGTGATT CTGTAAGGCT ATTACCTGTA
AACCAAACTA ATACTTATGA CAGAATAGTT GATAATATTC CTCAAATAAT TGAAATATTT
AAGGATATGG GCATTAAAAA GTGTAAAGAC AAAAAAGAAG ATTCTAATTT TTGTGATTAA
 
Protein sequence
MINSNHPIEN LMGTTMENIR DMIDVNTVVG DAIETRDGSY IIPISKVSFG FASGGSELPN 
KECEKIDDRF AFGGGSGAGV SVKPVAFLVL KGDSVRLLPV NQTNTYDRIV DNIPQIIEIF
KDMGIKKCKD KKEDSNFCD