Gene CPF_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2023 
Symboludk 
ID4203237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp2263965 
End bp2264591 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content30% 
IMG OID638082892 
Producturidine kinase 
Protein accessionYP_696456 
Protein GI110801353 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID[TIGR00235] uridine kinase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGAC CAATTTTTAT AGGAATAACA GGAGGCACTG GCTCAGGTAA AAGTACAATA 
GCTAAGGAGA TATATAGACA ATTTGGTGAA GATTGTATAG CAATGATAGA GCAAGATTCA 
TATTATAAGG ATCAAAGCCA TTTATCAATG GAGGATAGAG TTAAAACTAA CTACGATCAT 
CCAAATGCTT TTGATAACAA TCTTTTAGTT TCACATTTAG AATCACTTTT AAATGGACAT 
TCTATACAAA AACCTAGTTA TGACTTCTCT ATACATAATA GAATTGAAGA TACAACTAAG 
GTTGAGCCAA AAGAAATTGT TATTGTAGAA GGAATATTAA TACTAGAAGA TCCAAGAATA 
AGAGAACTTC TAGATATAAA GATTTACGTT GATACAGATG CTGATGTTAG AATCATAAGA 
AGAATGGTCA GAGACATAAA TGAAAGAGGA AGAACTATGG AGTCTGTTAT AAATCAGTAC 
TTAAATGTAG TAAAGCCTAT GCATAATCAA TTTACAGAAC CTACAAAGAA ATTTGCTGAT 
ATAATAATAC CAGAAGGTGG ACATAATAAA GTTGCTATAG ATATTATTGT TGCAAAAATA 
AAAGAGGTTT TAGGAAAATA CGAATAA
 
Protein sequence
MKRPIFIGIT GGTGSGKSTI AKEIYRQFGE DCIAMIEQDS YYKDQSHLSM EDRVKTNYDH 
PNAFDNNLLV SHLESLLNGH SIQKPSYDFS IHNRIEDTTK VEPKEIVIVE GILILEDPRI 
RELLDIKIYV DTDADVRIIR RMVRDINERG RTMESVINQY LNVVKPMHNQ FTEPTKKFAD 
IIIPEGGHNK VAIDIIVAKI KEVLGKYE