| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2021 |
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| Symbol | |
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| ID | 4203096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2261421 |
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| End bp | 2262122 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638082890 |
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| Product | sporulation sigma factor SigK |
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| Protein accession | YP_696454 |
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| Protein GI | 110799358 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02846] RNA polymerase sigma-K factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.653409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCATGT TACAATACTT ATTAGAATTA GTTGGTAGTA AAATATTTTT AACTGGCTAT
GTAACAGGAA ATTCTACTTT TCCAAAGCCT TTAAATGAGA AGGAAGAAAA AATCTATTTA
GAAAGGTTAA AAGATGGAGA TGTTGAGGCA AAAAGAGTAC TAGTTGAGCG GAATTTAAGA
CTAGTAGCAC ATATAGTTAA GAAGTATTCT TCAAATTACC AAAACTCAAA AGAAATGGAT
GATTTAATAT CTATAGGAAC AATAGGTTTA ATAAAGGCTA TAGATTCTTT TGACACTAAC
AAGGGAATAC GACTTGCAAC ATATGCAGCT AAGTGTATAG ACAATGAAAT ACTTATGTTT
TTTAGGAATA CTAAGAAGAC AAAGGGAGAA GTATTCCTTC AAGATCCTAT AGGAGTAGAT
AAGGAAGGTA ATGAAATTTG TCTCATAGAT ATTTTAAGTA GTGATTCTGA TTCGGTATTA
GAGGCTGTTG AAAATTCATT ACAGGTTAAG GAGCTTTATA AAAAGATGTC CGATATCTTA
AGTCCTAGGG AGAAAGAAAT AATTAAAATG AGATACGGTC TTTTAGATGG TGATATAAAA
ACACAGAGGG AAATAGCGGC AATTCTTGGT ATATCAAGAT CATATGTATC TAGAATAGAA
AAAAAGGCAT TAAAAAAATT AAATAAGGAA TTTAAATGTT AA
|
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| Protein sequence | MFMLQYLLEL VGSKIFLTGY VTGNSTFPKP LNEKEEKIYL ERLKDGDVEA KRVLVERNLR
LVAHIVKKYS SNYQNSKEMD DLISIGTIGL IKAIDSFDTN KGIRLATYAA KCIDNEILMF
FRNTKKTKGE VFLQDPIGVD KEGNEICLID ILSSDSDSVL EAVENSLQVK ELYKKMSDIL
SPREKEIIKM RYGLLDGDIK TQREIAAILG ISRSYVSRIE KKALKKLNKE FKC
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