| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2015 |
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| Symbol | sigE |
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| ID | 4202170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2255781 |
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| End bp | 2256488 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638082884 |
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| Product | sporulation sigma factor SigE |
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| Protein accession | YP_696448 |
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| Protein GI | 110798939 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02835] RNA polymerase sigma-E factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.785691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAAATA TAAGACTTTT GCTTAATAAG TTATTTACTA AATTAGATAT TATGGTAGAA
CCAATTTATT ATGTTGGGGG GAATGATGTT CTTCCAGCAC CTCTTAGTAA AGAAGAGGAA
GAGGAGCTAG TTAACAAATT AGGGGAGAAT GATGAAGCTA TTAGAAGTAT TCTTATTGAG
AGAAATTTAA GACTAGTTGT ATATATAGCT AGAAAATTTG AGAATACTGG TGTAGGAGTT
GAGGATTTAA TTTCTGTAGG AACAATTGGA CTTATAAAGG CAGTAAATAC ATTTAATCCT
GAAAAAAAGA TAAAGCTTGC AACCTATGCA TCAAGATGTA TAGAAAATGA AATTCTTATG
TATTTAAGGA GAAATAGCAA GGTTAAAGCT GAGATATCAT TTTATGAGCC CTTAAATATA
GACTGGGATG GAAATGAACT TTTACTTTCA GATATACTTG GCACAGATGA TGATATTGTT
TACAATCTGA TAGAAGATGA AGTTGACAAG GAATTATTAT TTACTGCAAT GAAGAATCTT
TCAAATAGAG AAAAAGAAAT TGTTGAATTA AGATTTGGAC TATGTGGATA TAAAGAAAAA
ACTCAAAAGG AAGTAGCTGA TATGCTAGGA ATATCTCAAT CTTATATTTC AAGGTTAGAG
AAGAAAATTA TAAAAAGATT AAAGAAAGAA ATTAACAAAA TGATTTAA
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| Protein sequence | MLNIRLLLNK LFTKLDIMVE PIYYVGGNDV LPAPLSKEEE EELVNKLGEN DEAIRSILIE
RNLRLVVYIA RKFENTGVGV EDLISVGTIG LIKAVNTFNP EKKIKLATYA SRCIENEILM
YLRRNSKVKA EISFYEPLNI DWDGNELLLS DILGTDDDIV YNLIEDEVDK ELLFTAMKNL
SNREKEIVEL RFGLCGYKEK TQKEVADMLG ISQSYISRLE KKIIKRLKKE INKMI
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