Gene CPF_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2013 
Symbol 
ID4202814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2254520 
End bp2254792 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content27% 
IMG OID638082882 
ProductPRC-barrel domain-containing protein 
Protein accessionYP_696446 
Protein GI110799094 
COG category 
COG ID 
TIGRFAM ID[TIGR02888] sporulation protein, YlmC/YmxH family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAA ATTTATTTTC TTTAAATAAT TTAAGGGCTA TGGAAGTGAT AGATGTAAGT 
GAAGGTAAAA AGTTAGGCTT AATAGCTGAT GTTAAGATAG ATTGTGATGA TAATAGAATA
TTATCTATTA TAATACCTGG AGAAAAAACA TCCTTTTTTA GTAAGTCAGA GGATATAGAG
ATAGAATGGT CTGATGTATA CAAAGTTGGA GTAGATGTTA TACTAATAGA TTCAAAAGGG
AAAAATATAC TAGATGTTCA AAAATATATA TAG
 
Protein sequence
MEENLFSLNN LRAMEVIDVS EGKKLGLIAD VKIDCDDNRI LSIIIPGEKT SFFSKSEDIE 
IEWSDVYKVG VDVILIDSKG KNILDVQKYI