Gene CPF_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1976 
Symbol 
ID4203405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2215117 
End bp2215611 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content31% 
IMG OID638082845 
Producthypothetical protein 
Protein accessionYP_696409 
Protein GI110799605 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA TTTTTTCAGA AATATGCTCA AAAAGAGAAA GAAGAAAATC TTTAGATTTT 
GTTCTGGATT TAAAAAGCTT CGAATTTGAA GGCGAAAATA TGAAGGTTAT AAAGCCTCTA
CATTTTACTG GTGAAGTTAT ATCTAATGAG TCTTTTATAG AGTTAGTAGG TAACATTACT
GGAGAACTTC AGATGAAGTG TTCAAGATGC TTAACTAATT TCTCTTATGA AGTATCAATA
GATATGGATG AGAAATTTAC AAATAATTCA AATCAAGAAG ATGATTCTAT TGCTTATGTA
GAAGGCGACG AATTAGATGT TGCTGAAGCG GTAGTAGAAA ACGTAATTTC AACCTTACCT
ATAAAAAGAC TTTGCAGCAT AGACTGCAAA GGGCTTTGTC AAAAATGTGG TATTGATTTA
AATAAAGAAA CATGCCAATG TGACAATGAA GAAATTGACT TAAGAATGGC AAAGCTAATG
GACTTGTTTA AGTAA
 
Protein sequence
MKLIFSEICS KRERRKSLDF VLDLKSFEFE GENMKVIKPL HFTGEVISNE SFIELVGNIT 
GELQMKCSRC LTNFSYEVSI DMDEKFTNNS NQEDDSIAYV EGDELDVAEA VVENVISTLP
IKRLCSIDCK GLCQKCGIDL NKETCQCDNE EIDLRMAKLM DLFK