Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1961 |
Symbol | rbgA |
ID | 4201487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2201835 |
End bp | 2202680 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638082830 |
Product | ribosomal biogenesis GTPase |
Protein accession | YP_696394 |
Protein GI | 110799613 |
COG category | [R] General function prediction only |
COG ID | [COG1161] Predicted GTPases |
TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.648804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATAA ACTGGTTCCC TGGCCATATG GTCAAAACGA AAAGAGAAAT ACAGAACAAT TTAAAGCTTG TAGATGCTGT TATAGAAATT AGAGATGCTA GAATACCTAA ATCTTCTAAA AATCCAGATA TAGACACTCT ATGTGCTGGT AAGCCTAGAG TAATACTTTT AAATAAGAGT GACTTAACTG ATCCTAAGGT AACTAAAGCT TGGAAAGATA GCTTAACTAA TGATGAAACA ATTGTTTTAG AAGTAAACGC TTTAAAAGGT GAAGGACTAA ATGCTATAAA ACCTGCTCTT TTAAAACTTT TAAAAGATAA ACATGATAGA TTAAAAGCTA AAGGTTTAGC TAAAATCACT ACTAGAGCTA TGGTTGTTGG AATACCTAAC GTTGGTAAAT CAACATTTAT AAATAAAATG GCTAAAAACA ATATAGCTAA AACTGGAGAT AGACCAGGTG TTACTAAGAA TAAACAATGG ATAAAAACTA AGTTAGGTAT AGAATTAATG GATACACCAG GAGTTTTATG GCCTAAATTT GAGGATGAGA TCGTTGGATT AAATTTAGCA TTTACTGGAG CTATAAAAGA CGAAATAATG GATACTGAAG AATTAGCTCT TAAACTAGTT GAAAGACTTC AAGAAACAAA TCCAGAAGAA TTAATGACTA GATATAAACT TACAGAACTT CATGAAAATC CATTAGATAA CTTAGATGCT ATAGCTAGAA AAAGAGGAGC TATAATGTCA GGTAATCAAA TAGATTACAA TAGAATTGCA GGAATAATTT TAGATGAATT TAGAGGCGGA AAAATAGGAA AAATATCTTT AGAAAAACCA GAATAG
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Protein sequence | MAINWFPGHM VKTKREIQNN LKLVDAVIEI RDARIPKSSK NPDIDTLCAG KPRVILLNKS DLTDPKVTKA WKDSLTNDET IVLEVNALKG EGLNAIKPAL LKLLKDKHDR LKAKGLAKIT TRAMVVGIPN VGKSTFINKM AKNNIAKTGD RPGVTKNKQW IKTKLGIELM DTPGVLWPKF EDEIVGLNLA FTGAIKDEIM DTEELALKLV ERLQETNPEE LMTRYKLTEL HENPLDNLDA IARKRGAIMS GNQIDYNRIA GIILDEFRGG KIGKISLEKP E
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