| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1955 |
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| Symbol | codY |
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| ID | 4203122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2194831 |
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| End bp | 2195607 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638082824 |
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| Product | transcriptional repressor CodY |
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| Protein accession | YP_696388 |
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| Protein GI | 110801201 |
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| COG category | [K] Transcription |
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| COG ID | [COG4465] Pleiotropic transcriptional repressor |
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| TIGRFAM ID | [TIGR02787] GTP-sensing transcriptional pleiotropic repressor CodY |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00079706 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGACAC TACTTAGTAA AACTAGAAGA TTAAATAAGA TTTTACAAAA ATCAGGTACT
GAAGCTATAG CTTTTGGAGA TATATGCCAA TTATTAAGTG ATGTTATGTC GTGTAATGTA
TATTTAGTTG GAAGAAAAGG TAGAATATTA GGTTATTCTT TTTCTGAAAA ATTTGAATGT
GACATAATGA AAGAAAAAGT TGTTGTTGAT AGAAAATTCC CAGAAGACTA CAATAATAAA
TTAATAAACA TTCAAGATAC AATTGCAAAC ATACCTAATA AAGGAATATG TGTTTTTGAA
GGGGTAGGAG AATGTTTAAT CTCTAAAAAA ATATCAACTA TTGTTCCTAT AGTTGGTAAT
GGAGATAGAT TAGGAACTTT ATTATTAGCT AGATTTGGGG AAGAATTTAA TGATGATGAC
CTAGTTTTAG CAGAATATAG TGCTACAATA GTTGGGATGG AGCTTTTAAG AGCTAGACAA
GGTGAAATAG AAGAAGAAGC ACGTAAAAAA GCGGTGGTTC AATTAGCTAT TGGAACTTTA
TCTTACTCAG AATTAGAGGC TGTAGAACAT ATTTTTAGTG AGTTAAATGG AGATGAAGGA
TTATTAGTAG CTTCTAAGAT AGCTGATAAA GTTGGAATAA CTAGATCAGT TATAGTAAAT
GCTCTTAGAA AATTTGAGAG TGCAGGAGTT ATTGAATCAA GAAGTCTTGG GATGAAAGGT
ACTCATATAA AAATATTAAA CGAAAAGTTA ATGGATGAAC TTAAAAAGAT AAAATAA
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| Protein sequence | MSTLLSKTRR LNKILQKSGT EAIAFGDICQ LLSDVMSCNV YLVGRKGRIL GYSFSEKFEC
DIMKEKVVVD RKFPEDYNNK LINIQDTIAN IPNKGICVFE GVGECLISKK ISTIVPIVGN
GDRLGTLLLA RFGEEFNDDD LVLAEYSATI VGMELLRARQ GEIEEEARKK AVVQLAIGTL
SYSELEAVEH IFSELNGDEG LLVASKIADK VGITRSVIVN ALRKFESAGV IESRSLGMKG
THIKILNEKL MDELKKIK
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