Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1935 |
Symbol | rpsO |
ID | 4202398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2173707 |
End bp | 2173970 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638082804 |
Product | 30S ribosomal protein S15 |
Protein accession | YP_696368 |
Protein GI | 110799206 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0184] Ribosomal protein S15P/S13E |
TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAAAA TAAGAAAACA AGAAATAATA GCTAAACATG CAAGACACGA AGGAGACACT GGTTCACCAG AAGTTCAAAT CGCGTTATTA ACAGAAAGAA TAAACTCTTT AACTGATCAC TTAAGAACAC ACAAAAAAGA CCACCACTCA AGAAGAGGTC TTTTAATGAT GGTTGGACAA AGAAGAGGTT TATTAAACTA CTTATATGAG CAAGATATCG AAAGATACAG AGCTATAATC AAAGAATTAG GATTAAGAAG ATAA
|
Protein sequence | MDKIRKQEII AKHARHEGDT GSPEVQIALL TERINSLTDH LRTHKKDHHS RRGLLMMVGQ RRGLLNYLYE QDIERYRAII KELGLRR
|
| |