Gene CPF_1910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1910 
Symbol 
ID4201850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2144855 
End bp2145709 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content29% 
IMG OID638082779 
Productmetallo-beta-lactamase family protein 
Protein accessionYP_696343 
Protein GI110800263 
COG category[R] General function prediction only 
COG ID[COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.404298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAATCA CCTCTAAAAA AGTTAGTTTA TTTTTAATAT TTATACTAGT AACATCAATA 
TTTTTATATT CTACTTCATA TTCAATTCCA AATGAAAATT TTACAGTCCA TTATATAGAT
GTAGGACAGG GAGATTCTGC TTTAATTCAA AGCAATGGTA AAAATCTTTT AATAGACGCA
GGTACTCCTG AATCTACTAA TTCTCTAGTA AAATATTTAA AAAACCTTGG AATTAAAAAG
CTTGATTTTA TAATAGCTAC TCATCCCCAT GCAGATCATA TTGGCGGTAT GGAATCTATT
ATTAAAAAAT TTGATGTAGA CTATTTTTGT GCACCAAAAG TTACAGAAAA TACTGATGTA
TTTAAAGGCA TGGTAACTGC ACTAAAAGAA AAGGATATTA ATATAAATAC CCTATCTAAA
TCAAAATCTC TTCCTATAGA TTTAGGTGAG AACACTAAAA TAGAAGTCTA TTCTCCTTCT
AATAAAGAGT ATGGAAACCT AAATAACTAC TCACCTATCC TTAAGATATA TTATGGTGAA
ACCTCCTTTT TGTTTACTGG AGATGCAGAG ACTGAAGCAG AAATGGAAGC TGTTAAATCA
AATGAAAATT TAAAGTCAGA TGTGTTAAAG GTAGGACATC ATGGAAGTAC AACTTCTTCA
ACAGATTCCT TTTTAAAAGA AGTTTCTCCT AAAATAGCTG TAATTTCTTC AGGGCTAGAT
AATTCATATG GACATCCAGC AAAAGAAACC CTAAAAAAAT TATCTTCCTA TAAAACTAAG
GTTTTTAGAA CAGATGAAGA TGGAACTATT ATTTTAACCT CTGATGGAAA ATCTATAAAA
AAGCATAAAA ACTAA
 
Protein sequence
MKITSKKVSL FLIFILVTSI FLYSTSYSIP NENFTVHYID VGQGDSALIQ SNGKNLLIDA 
GTPESTNSLV KYLKNLGIKK LDFIIATHPH ADHIGGMESI IKKFDVDYFC APKVTENTDV
FKGMVTALKE KDININTLSK SKSLPIDLGE NTKIEVYSPS NKEYGNLNNY SPILKIYYGE
TSFLFTGDAE TEAEMEAVKS NENLKSDVLK VGHHGSTTSS TDSFLKEVSP KIAVISSGLD
NSYGHPAKET LKKLSSYKTK VFRTDEDGTI ILTSDGKSIK KHKN