| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1884 |
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| Symbol | rbsK |
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| ID | 4203018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2120147 |
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| End bp | 2121079 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638082753 |
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| Product | ribokinase |
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| Protein accession | YP_696317 |
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| Protein GI | 110801422 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0118065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAGA TATGTGTACT TGGAAGTATG AATATGGATT TAGTTTTAAA GGTTAAAGAT
ATGCCTAAAG TAGGAGAAAC TATACTCTCT AAGTCATTTC AAAAAATAGC TGGTGGAAAA
GGAGCTAATC AAGCAGTAGC AGCTAAAAGA AGTGGCGCAG AAGTTTTCAT GATTTCTAAA
ATAGGAAAAG ATGAAAATGG AAGAGAGTTA AGAGATAAAT TAGTAGAAGA TAATATAGAT
GTTAAATATG TTTTTGAAGA TAGAATAGAG CCAACTGGAA TGGCTTTAAT AATGGTAAAT
GATAATGGAA ATAATTCAAT AATTGTTAAT GCTGGTTCAA ATATGACATT AACAAAAGAT
GAAATACATA GTGCTGAAAA TTTAATAAAA GAATCAGATA TTATAATTTC ACAATTTGAA
ACACCAGAGG ATATTACAAT AGAAGCATTT AAAATAGCTA AGGAAAATGG AAAAGTTACA
ATATTAAATC CAGCTCCAGC TAAAAAAATA AAAGATGAAT TATTAAATTA CACAGATATA
ATAGTTCCAA ATGAAACAGA AGCGGAGCTT TTAACTGGAA TTGAAATAAA ATATATAGAA
GATGCTAAAA AAGCTGGGGA TATATTCTTA GGTAAAGGAG TTAAGTTTGC AATTATTACT
CTTGGTGAAA AGGGAGCAGC TTTAATAGGA AAAGATTTTT GTGAAATAGT TCCAGCGTAT
AGAGTTAATG CAATAGATAC TACAGCTGCT GGAGATAGCT TCATTGGAGG CTTAAGTTCA
AAGTTAGATA CTAAAAATTT AGGAAGAGAG ACTTTAAGTA GTTCCATAAG ATTTGGAAAT
AAGGTATCAT CAATAGCAGT ACAAAGGAAA GGGGCTCAAC CATCAATACC ATATCTAAAG
GAAGTTTTAG AAGTTTATAA GGGAGAAGAG TAA
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| Protein sequence | MNKICVLGSM NMDLVLKVKD MPKVGETILS KSFQKIAGGK GANQAVAAKR SGAEVFMISK
IGKDENGREL RDKLVEDNID VKYVFEDRIE PTGMALIMVN DNGNNSIIVN AGSNMTLTKD
EIHSAENLIK ESDIIISQFE TPEDITIEAF KIAKENGKVT ILNPAPAKKI KDELLNYTDI
IVPNETEAEL LTGIEIKYIE DAKKAGDIFL GKGVKFAIIT LGEKGAALIG KDFCEIVPAY
RVNAIDTTAA GDSFIGGLSS KLDTKNLGRE TLSSSIRFGN KVSSIAVQRK GAQPSIPYLK
EVLEVYKGEE
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