Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1872 |
Symbol | |
ID | 4203642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2103600 |
End bp | 2105891 |
Gene Length | 2292 bp |
Protein Length | 763 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638082742 |
Product | ATP-dependent DNA helicase UvrD |
Protein accession | YP_696306 |
Protein GI | 110799377 |
COG category | [R] General function prediction only |
COG ID | [COG3973] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATA ATAAGATTTT AACTTATGAG AGAGAAGTCC TTTCAGAAAC TAAAAGGTGG ATTGAAAGTG AAGAGGAAAG ATTAGAAGGT GAAAAGTTAA AAGCCAATGA AAAATTAGAT GCTTTAAATA AGAAATCTAA GGGAGCCTAT GATCCAGAGA TAGAAATAGT TAAGAAGTCT GTGGACTTTT TATCAAAGGA AGAAGAAAAA TTTAAAGAAG CTTATAATAA GCCATACTTT GCAAGAATAG ATTTTAGGGA ATATAGAAAA GATTTTGAAA GTTTTTATAT AGGTAAATGC GGACTTGGTG ATATGCTAGA AGGAGAAGAA AAGGTAATAG ATTGGAGAGC GCCACTAGCT GATCTTTATT ATAGTGGTAC TCAAGGAGAG GCATATTATA AGGCACCTAT TGGGGTCATT GAGGGTGAGC TTAGTTTAAA GAGAAAATTT CTTTTTGATG ATGAGCATAG CTTAAAGGAA TGTTTTGATG AGGGAATTAA TGAAATTATT TTAAAATCTG GTCTTAATGA AGAAGGGGAT GGGTTAATAG ATGAATTCCT TAGAATTAAT TTAGAAAATA GCACAGGTAC TAAATTAAAG GATGTAGTAG CTACTATACA AAAAGAGCAG AATGATATAA TAAGAGCACC TAAAAATTCA CCTTTAATAA TACAAGGATC AGCAGGTTCG GGAAAAACCA CTGTAGCTCT TCATAGACTA GCTTATTTAT TATATAGATA TAAGGAAACC ATAACTGGAG AAGATATTTT AGTTGTAGCG CCAAATAAAA TATTTTTAGA TTATATTTCT GAAGTGTTGC CTAACTTAGG AGTAGATAAG GTTGAACAAA AAACTTTTGA GGAACTAGCC CTAAAAAAGT TAGGTATGAA GGGTAAAGTT ATAACTAAGG ATAAAAAATT AGTAGAAATT TTAGAAAATG ATTTAGAAAA AAATAAATAT ATAATGAATG ATAGTAAAAT AAAAGGGTCT ATATTATTTA AAGAAATGTT AGATAGATAT ATTCAAATTC TTGAAAGAGA AGATAGCGAT ATAGATAATA TAAGAATTTG TGGATATTCA GTTTTTGATT CAAAGGAGAT AAAAAGATTA TTCTTAAAGG ATTTAATAAA ATATCCTGTT AACAAGAGAA AGGATGAAAT CAAAAACTAT TTTTCTAAAA AATTAGGAGA AAAGGTAAGT AAGGTTTTAG ATAAGGTTGA TTTTCAGTAT GAGTATAGAA TAGCTAGACT TAAAAAAAGT ATGGAAGATT CTAAGGAAAG AAGAGAAAAA CTTATAGAGC TTTATGATGA GAGAGATAAT CATAAAAAAG AAATAAAAAA GTCTGCTAGA AAAGAATTTA ATGAATACTT TAATAGATGG AAGGGTATAG ATACCACTAA TGTTTATAAA AATTTCTTTG AAAACAAGGA GATTTTTAAT GAAGTAACAG ATGGAAAAAT ACCAGAGAAG TTAGCTGAAT ATATGAGAGA AAATTTGGCT AATAATATAG ATAAAAAAAT AATAGATTCA GATGACTTAG CAGCTATGCT TTATTTAAAA TTTAGAATAG AAGGAATAGA GGAAAGCAGC TTATTAAAAC ATATTGTCAT TGATGAGGCA CAGGACTATT CTATGCTACA GTTATATGTT ATGTCTATGA TGGCTTCAGG AAAGTCTTTA ACAATAGTTG GAGATATTGG TCAGGGAATA TATTCATTTA AAGGCATTAA TGATTGGAAA GAGGCTATTA AATTGGTTTA TGATGAAAAT GCAGAGTATA AGCACTTAAG CCAAAGCTAT AGAAGTACAG TAGAGATAAT AAATTATGCA AATAAGGTTT TAGTTAAACA AAATACCTAT GAAGAGCCAG CAAAACCAGT TTTAAGACAT GGAATGGTTC CAGAGGAAAT TGAGTTTAAT AATGCAAAAG AATTTTGTGA AAGATTAGAT AACATAGTTA AAAAAGTAAA AGATGAAGGA AAAACTTCAA TAGCTATAGT TGGTAAAACC CTTGATGAAT GTAAGAAGAT AAGAACTTTA GTTAAGAAAT ATTCAAATTA TGACTTTGAA TTAATTAAAG ATGATCAAAA AGAGTTTGAT TTGAACTTAA TAATTATACC GTCATATCTT ACTAAAGGAT TAGAATTTGA CTGTACTATA GTTTATAATT TAAATAAGGA AAATTATAAT GATAATGAAA TAGATAAGAA ACTTCTTTAT GTGGTTTTAA CTAGAGCGTT ACATTATGAA TATATATTTT ATAAAGAGGA AAAATCACCT TTAATAGGTT GA
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Protein sequence | MSDNKILTYE REVLSETKRW IESEEERLEG EKLKANEKLD ALNKKSKGAY DPEIEIVKKS VDFLSKEEEK FKEAYNKPYF ARIDFREYRK DFESFYIGKC GLGDMLEGEE KVIDWRAPLA DLYYSGTQGE AYYKAPIGVI EGELSLKRKF LFDDEHSLKE CFDEGINEII LKSGLNEEGD GLIDEFLRIN LENSTGTKLK DVVATIQKEQ NDIIRAPKNS PLIIQGSAGS GKTTVALHRL AYLLYRYKET ITGEDILVVA PNKIFLDYIS EVLPNLGVDK VEQKTFEELA LKKLGMKGKV ITKDKKLVEI LENDLEKNKY IMNDSKIKGS ILFKEMLDRY IQILEREDSD IDNIRICGYS VFDSKEIKRL FLKDLIKYPV NKRKDEIKNY FSKKLGEKVS KVLDKVDFQY EYRIARLKKS MEDSKERREK LIELYDERDN HKKEIKKSAR KEFNEYFNRW KGIDTTNVYK NFFENKEIFN EVTDGKIPEK LAEYMRENLA NNIDKKIIDS DDLAAMLYLK FRIEGIEESS LLKHIVIDEA QDYSMLQLYV MSMMASGKSL TIVGDIGQGI YSFKGINDWK EAIKLVYDEN AEYKHLSQSY RSTVEIINYA NKVLVKQNTY EEPAKPVLRH GMVPEEIEFN NAKEFCERLD NIVKKVKDEG KTSIAIVGKT LDECKKIRTL VKKYSNYDFE LIKDDQKEFD LNLIIIPSYL TKGLEFDCTI VYNLNKENYN DNEIDKKLLY VVLTRALHYE YIFYKEEKSP LIG
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