Gene CPF_1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1834 
Symbol 
ID4203835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2069241 
End bp2070062 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content26% 
IMG OID638082704 
Productputative cobalt ABC transporter, permease protein 
Protein accessionYP_696268 
Protein GI110800706 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.983784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTACAT ATATAAAAAA GGATTCTCCT ATTGATAAAC TTACTGGAGC AACTAAGCTT 
ATTTGCTTTA TATTTTGGAC ATTAGCTGCC ATGCTTACAT ATGATACAAG AGTATTAATT
GGCATGCTTA TATTTAGTTT AATTATATTT AAGGTCTCAA AAATAGAGTT TAAAGAAGTT
TCTTTTATAG TTTATTTTAT ATTATTCTTT TTACTTTTAA ATGATTTAGC CATTTTTATA
TTTTCACCTT ATGAAGGAGT TAATATATAT GGAACAAGAC ATGATATATT TCATATAGTT
GGACCATACA CACTAACATG GGAACAATTA TTTTATGAGT TTAACGTTAC ATTAAAATAT
TTATCAGTTA TACCTATGGC ACTTTTATTT ATACTTGCAA CCAATCCAAG TGAATTTGCT
GCATCTTTAA ATAAAATAGG TGTTAGTTAC AAAATATCAT ATTCTGTATC AATAGCTTTA
AGATACATAC CAGATATTCA AAGGGAGTAT CATGATATAT CCTTTGCTCA ACAAGCAAGA
GGAATTGATA TGTCTAAAAA AGAAAAGTTA GGAAAAAGAA TAAAAAATAT ATCTTCAGTT
TTAATGCCAC TTATTTTTTC AAGTTTAGAT AGAATAGAAA ATATAAGTAC AGCAATGGAA
CTTAGAGCCT TTGGAAAGAA TAAAAAAAGA ACTTGGTACA ATGAAAGAAA ATTTTCTAAG
GGTGATTACT TAGCTATTAT TGTAGTTATC TTAATATTTG CTTTATCATT ATACTTTACA
TTTAATAATG GAAGTAGATT TTATAATCCC TTTGTAAAAT AG
 
Protein sequence
MLTYIKKDSP IDKLTGATKL ICFIFWTLAA MLTYDTRVLI GMLIFSLIIF KVSKIEFKEV 
SFIVYFILFF LLLNDLAIFI FSPYEGVNIY GTRHDIFHIV GPYTLTWEQL FYEFNVTLKY
LSVIPMALLF ILATNPSEFA ASLNKIGVSY KISYSVSIAL RYIPDIQREY HDISFAQQAR
GIDMSKKEKL GKRIKNISSV LMPLIFSSLD RIENISTAME LRAFGKNKKR TWYNERKFSK
GDYLAIIVVI LIFALSLYFT FNNGSRFYNP FVK