Gene CPF_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1816 
Symbol 
ID4201170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp2048625 
End bp2049128 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content26% 
IMG OID638082686 
ProductDedA family membrane protein 
Protein accessionYP_696250 
Protein GI110799416 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.106663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTATAA GTGTAATTAT AGCATTACTT GGGATAGTTC CCTCTGTATT TGTTACAGGA 
GCTAATATAG TATTCTTTGG TCCTATAAAT GGATTTTTAA TTTCTTTATT AGGTGAAGTT 
ATAGGGGGAT GGATAAGTTT TAAAGTATAT AGAAAAGGTA TAAATAAATT TGCAGGAAAT 
ATTGAAGGGA AATACGAATT AATAGATAAA ATTGTAAAGA GTGAAGGGAG AAATGTTGGG 
ATTTTAATTT TTGAAGGAAG ATTAATACCT TTTATTCCAT CAGGTTTAGT AACCTTAGCT 
GCTGCTATGA GCAGGGTTAA TAGTTTTACA TTTATAATAT CTACATTCTT AGGGAAAATA 
ACTTCTATTT TATTAGAAGT TTTAGCTAGT TATGGGGTGA TAATGGCTTC TCAAAAAAAT 
TTAAAACTTG TTATTGGAGT TTTAAGTTTA ATTTTGTTTT TATTAACATT AAAAAAATTA 
AAAGATAAAA CAAACAAAAA ATGA
 
Protein sequence
MFISVIIALL GIVPSVFVTG ANIVFFGPIN GFLISLLGEV IGGWISFKVY RKGINKFAGN 
IEGKYELIDK IVKSEGRNVG ILIFEGRLIP FIPSGLVTLA AAMSRVNSFT FIISTFLGKI 
TSILLEVLAS YGVIMASQKN LKLVIGVLSL ILFLLTLKKL KDKTNKK