Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1744 |
Symbol | |
ID | 4203655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1963333 |
End bp | 1963833 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638082616 |
Product | DedA family membrane protein |
Protein accession | YP_696180 |
Protein GI | 110799757 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0059834 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACATAG ATGCTGTGCT AAATTATTTT GCAACTTATG GTTTAACCTT GTTATTTGTA ATAGTATTTT TAGAATATTT AAATCTACCA GGACTACCAG CTGGAATAAT AATGCCTGCT GCGGGGATAT TAGCTTCTAG AAATAATCAA AGTATAGTTC TTGTGGTTTT TATATCAGTT GTGGCTGGAG TTTTAGGAAG TATAGTACTA TATTTAATAG GATATTATGG AGGGGCAATA CTCTTAGATA AATTAGGATT GAAGTTTCCT AAGGTTCAGC CAACCATAAG AAAAAGCAGT ACTATTTTAA AGGAAAAAGG ACTTTTTGGA GTTTTTCTTT GTAGACTATT GCCTGTTTTA AGAACCATAG TTTCTATTAT AGCAGGTTCA GTAAGAATGA ATTTCTTTAA GTTTTTAATC TATTCTACTC CAGGGATATT CTTGTGGAAT TTGGGATTTA TATTTACAGG ATATTTCTTT GGAGATGTAT TTTTAAAATA A
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Protein sequence | MDIDAVLNYF ATYGLTLLFV IVFLEYLNLP GLPAGIIMPA AGILASRNNQ SIVLVVFISV VAGVLGSIVL YLIGYYGGAI LLDKLGLKFP KVQPTIRKSS TILKEKGLFG VFLCRLLPVL RTIVSIIAGS VRMNFFKFLI YSTPGIFLWN LGFIFTGYFF GDVFLK
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