Gene CPF_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1744 
Symbol 
ID4203655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1963333 
End bp1963833 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content31% 
IMG OID638082616 
ProductDedA family membrane protein 
Protein accessionYP_696180 
Protein GI110799757 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0059834 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATAG ATGCTGTGCT AAATTATTTT GCAACTTATG GTTTAACCTT GTTATTTGTA 
ATAGTATTTT TAGAATATTT AAATCTACCA GGACTACCAG CTGGAATAAT AATGCCTGCT
GCGGGGATAT TAGCTTCTAG AAATAATCAA AGTATAGTTC TTGTGGTTTT TATATCAGTT
GTGGCTGGAG TTTTAGGAAG TATAGTACTA TATTTAATAG GATATTATGG AGGGGCAATA
CTCTTAGATA AATTAGGATT GAAGTTTCCT AAGGTTCAGC CAACCATAAG AAAAAGCAGT
ACTATTTTAA AGGAAAAAGG ACTTTTTGGA GTTTTTCTTT GTAGACTATT GCCTGTTTTA
AGAACCATAG TTTCTATTAT AGCAGGTTCA GTAAGAATGA ATTTCTTTAA GTTTTTAATC
TATTCTACTC CAGGGATATT CTTGTGGAAT TTGGGATTTA TATTTACAGG ATATTTCTTT
GGAGATGTAT TTTTAAAATA A
 
Protein sequence
MDIDAVLNYF ATYGLTLLFV IVFLEYLNLP GLPAGIIMPA AGILASRNNQ SIVLVVFISV 
VAGVLGSIVL YLIGYYGGAI LLDKLGLKFP KVQPTIRKSS TILKEKGLFG VFLCRLLPVL
RTIVSIIAGS VRMNFFKFLI YSTPGIFLWN LGFIFTGYFF GDVFLK