Gene CPF_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1723 
Symbol 
ID4203331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp1947179 
End bp1947769 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content32% 
IMG OID638082595 
Producthypothetical protein 
Protein accessionYP_696159 
Protein GI110801254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.064604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTATA AAGATTACCA ATGTGATTCT CAAGGAATAG AATTAAATGA ATTAGAAGAA 
TTATTTGAAG ATGCAAGATA TAATAACTAT CATCATAATC ACTGTGATAA CCATGACCAT 
CACAATCATT GTGATCATCA TGATCATTGC AATCATCATG ATCATAATCA TGGATGCTGT 
GATGATGGAA GAGATTGTTG TAAGAGACCT CAACCAAAAC CAATTCCTAA GAAAGGAACT 
ATTGAAGTAC AATCTTTATT AGGATGTTCT GATGGTGAAC CAATAAGTGG AATGCCAATA 
GAATTATATA AAGTAGATTG TAACACTGGT TTTGAACTTG TAGATTGTAA ATATACAGAT 
CGTTGTGGTA AGGTTTGTTT TAAATGTTTA GAAGATGGAT TATATGCTGT TAAACAACCT 
GTAGACCGTT GCTACTTTGA AGCACCAGAA TACTATCCAT GCTATGAAGT ATGTATTTCT 
CCAAGAAATA AATATGCTAA AGTAGTAATA ATCAACAAAT TAAGAGATAG GGAAGACTGT 
AATAGACCAC CTATACGTTG TAGATGCAAT AGTGAAGCAA GCTGTCAATA A
 
Protein sequence
MDYKDYQCDS QGIELNELEE LFEDARYNNY HHNHCDNHDH HNHCDHHDHC NHHDHNHGCC 
DDGRDCCKRP QPKPIPKKGT IEVQSLLGCS DGEPISGMPI ELYKVDCNTG FELVDCKYTD 
RCGKVCFKCL EDGLYAVKQP VDRCYFEAPE YYPCYEVCIS PRNKYAKVVI INKLRDREDC 
NRPPIRCRCN SEASCQ