Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1716 |
Symbol | |
ID | 4202412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1939665 |
End bp | 1940162 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638082588 |
Product | PTS system, IIB component |
Protein accession | YP_696152 |
Protein GI | 110800107 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAACTC AAATACGTGT AGATGACCGT TTAATACATG GACAAGTAGC AGTAGTATGG ACAAAGGAGC TAAATGCACC ACTTTTAGTA GTAGCAAATG ATGAGGCTGC AAAAAATGAA GTTATGCAAA TGACTTTAAA AATGGCTGTA CCAAATGGAA TGAAACTTTT AATTCGTTCA GTTGAGGATG CTATAAAAGT TTTTAATGAT CCTCGTGGTA AGGATAAAAG AATGTTTGTT ATAGTAAACA GTGTATCAGA TGCTACAAAG ATTGCTAAAG AAGTTAGTGA TATAGAATCT GTAAACGTTG CTAATGCAGG ACGTTTTGAC AAATCTAATC CAAAAGACAA AGTAATGGTA TTTTCAAGTG TTCAATTAAA TCCAGATGAA TTAAAAGCTG CTAAGGAATT ATCAGAGCTA ACTAATGTTA AATCTTATAA TCAAGTATTA CCATCAAATC CACAGCTTGA TTTAAAGAAA GCTTTAGCAC AATTTTAA
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Protein sequence | MITQIRVDDR LIHGQVAVVW TKELNAPLLV VANDEAAKNE VMQMTLKMAV PNGMKLLIRS VEDAIKVFND PRGKDKRMFV IVNSVSDATK IAKEVSDIES VNVANAGRFD KSNPKDKVMV FSSVQLNPDE LKAAKELSEL TNVKSYNQVL PSNPQLDLKK ALAQF
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