| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1711 |
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| Symbol | |
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| ID | 4203239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1932814 |
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| End bp | 1934205 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638082583 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_696147 |
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| Protein GI | 110801355 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0339316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAGA GAATTGATTT AACCGAAGGA AAAATAACAA GCAACCTTAT AAAACTTTCC
ATACCTATTA TGGCTACCTC TTTTATACAA ATGGCTTATA ACATGGCAGA TATGATATGG
GTTGGTAGAA TAGGAAGTAA TGCAGTGGCA GCTGTTGGAA CAGCAGGATT CTTTCCTTGG
CTTGGTATGG CCTTTGTAAT GATTTCTAAG GTGGGAGCTG AGATAAAAGT AGCACAGAGC
TTAGGAAGAA ATGATATAGA TAGCACAAAG GATTATATAA AAAGTGCCTT TCAAATAAAT
ATTATACTAG CTATTATTTA TTCAATAATA TTACTTTTAT TTAATAGTCA GTTAATAGGA
TTTTTTGACT TAGGTGATGC TGAAGTTATA AAAATGGCTA AGACATATTT AATTGCAGTT
GCTTTAGGAA TGATATTTAA CTTTTTAAAT CCAGTATTTA CAGCGGTATT TACTGGTTCA
GGAGATAGTA GAATTCCTTT TATAGCTAAT ACTATAGGAT TAATTTTTAA CATAGTTTTT
GATCCAATAT TAATTTTTGG TATAGGAATA TTCCCAGAGA TGGGTGTACT AGGAGCTGCC
TTGGCTACAG TTTTAGCTCA GGTTATAGTT ACAGTTACAT TTTTATATAT AATGATAAAA
AGTAAGGCTG AATACTTAAA AATAAATATT TTAAGTGGAA TTAAAATAAA TTGTATGAAA
ACTTTATTCC ATATTGGATT ACCTGCAGCA CTTCAGAGTG GATTATTTAC TGTTTTTTCA
ATGTTTATAG GGAAAATAGT TGCAGTGTTT GGCCCTGTTC CTATAGCTGT TCAAAAGGTG
GGTTCACAGG TTGAAGCCAT TGCATGGATG ACAGCAGGTG GAATATCTAC GGCCTTAAGC
ACATTTGTTG GACAAAATTA TGGAGCTGGA AAGCTAAAAA GAATAGTAAA GGGATTTAAT
ATAACTATGA TAATTTCTCT TATAGTAGGA GTATTTGCTT CCTTAGTATT AATTTTCTTT
GGAGAAGAGA TATTTAGAAT ATTTATACCA GAGGCACAAG CTATAGAACA AGGAACAGTT
TATTTAAAGA TACTTGGCTA TTGTCAGATT CTTGTTTGCG TAGAAATAAC AACAACAGGA
GCATTTAATG GATTAGGAAG AACTTATATA CCATCAATAA TAAGTATATT ATTAACAGGA
GCAAGAATAC CAATGGCTTA TATTATGTGT AAACCTGAGT TCTTAGGATT AGAAGGTATT
TGGTGGGCCA TAAGTATAAC AGGTGCTTTA AAAGGGGTAG TAGTATATGC AATATATAGA
TACTTATATA AGAAAAACAA ACTTTTTAAA GTATATAAGG ATGAAAATGG AGAGGAATGT
ATAAGTATAT AA
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| Protein sequence | MDKRIDLTEG KITSNLIKLS IPIMATSFIQ MAYNMADMIW VGRIGSNAVA AVGTAGFFPW
LGMAFVMISK VGAEIKVAQS LGRNDIDSTK DYIKSAFQIN IILAIIYSII LLLFNSQLIG
FFDLGDAEVI KMAKTYLIAV ALGMIFNFLN PVFTAVFTGS GDSRIPFIAN TIGLIFNIVF
DPILIFGIGI FPEMGVLGAA LATVLAQVIV TVTFLYIMIK SKAEYLKINI LSGIKINCMK
TLFHIGLPAA LQSGLFTVFS MFIGKIVAVF GPVPIAVQKV GSQVEAIAWM TAGGISTALS
TFVGQNYGAG KLKRIVKGFN ITMIISLIVG VFASLVLIFF GEEIFRIFIP EAQAIEQGTV
YLKILGYCQI LVCVEITTTG AFNGLGRTYI PSIISILLTG ARIPMAYIMC KPEFLGLEGI
WWAISITGAL KGVVVYAIYR YLYKKNKLFK VYKDENGEEC ISI
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