| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1706 |
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| Symbol | pepF |
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| ID | 4203025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1928365 |
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| End bp | 1930164 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638082578 |
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| Product | oligoendopeptidase F |
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| Protein accession | YP_696142 |
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| Protein GI | 110801429 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR00181] oligoendopeptidase F |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.615745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAGG TCAAAAAACT TAGAAGAAGA GATGAAATTC CAGAAAGTGA TAAGTGGAGA
ATTGATAAAA TTTATGAAAC TCCAGCTAAA TGGAATGAGG AATTAAATAA GTTAAAAGAG
GAAGCTCCAA AATTAAAAGA TTTTGAGGGA AAGTTAGGAA ACAAGGAAGA CTTAAAAGCT
TTTCTTTTAT TAAATGAAAA GTTAAGCAGA AAACTTGGTA AACTATATGT TTATGCTCAT
ATGAGAAGTC ATGAGGACAC ATCTAATCCT GAAATGCAAT CTTTAGTAAA TAAAATAGAT
CCATATTCAG CAGAGTTTTC AAGTTATACT GCATACTTTG TTCCAGAGAT ATTAAGCTTA
AAAGAAGGAA CAATAGAAAA TTTCATAAAT GAGGATAAGG ATTTAAAACA ATATAAAATA
TATTTTGAAA TGATATTAAA TGAAAAGCCT CATATATTAT CAAAGGAAGT TGAATCTGTT
TTAGCTTCTG TATCAGATTG TTTAGGAGCT CCAGAGAGCA TATATTCAAT GCTTACTAAT
TCAGATATGA CTTTTGGAGA GATAGTAGAT GAAAGTGGTA GAAAGGTAGA ATTAACTGAA
GGAAACTATA TTTCTTTTAT AAAGAGCAAA GATAGAAAGG TAAGAGAAGC TGCCTTTAAA
CTTTTATTTG GAACATACAA AAAGTATGAA AATACTTTAG CAACAAGTTT AACAAGTTCT
ATTAAAAACT TTGTTTTTGA AAGCAAAACA AGAAAATATA ATAGTTCCTT AGAGGCTTCT
TTAAAACCTA ATAATATTCC AGTAGAAGTT TACTATAATG CTTTAAAAAC TGTAGATGAA
AATATGGATG CTCTTCATAG ATATGTTAGA ATTAAGAAAA AACTTCTTAA CTTAGAAGAA
ATTCATATGT ATGATTTATA TGTTCCAGTT ATAGAATGCA AAAAAGAACA TTTAGAGTAT
AAGGATGCCA TAAGTTTAGT TGAAGAAGGA TTAAAACCTT TAGGAAAAGA ATATTTAGAC
ATATTCAATG AAGGAATAAA TGAAGGTTGG ATAGATGTAT ATGAAAATAA AGGAAAGAGA
AGTGGAGCTT ATTCATGGGG ATCCTATGAT ACTATGCCAT ATGTATTATT AAACTATAAT
TATGAGTTAA ATGATGCATC AACTTTAGCT CATGAAATGG GTCATTCAAT ACATTCTTAT
TATACTAGAA AGACTCAACC TTATATTTAT GGAGATTATA GTCTTTTCTG TGCAGAAGTT
GCTTCAACAA CAAATGAAAT TTTACTTATA CATCATTTAA TAGAGAAAGA AACTGATAAA
AATAAAAAAT TATATCTAAT AAATCAAGAG TTAGAGCAAA TAAGAACAAC TGTCTTTAGA
CAATTAATGT TTGCAGAATT TGAGTTAAAA ACTCATGAAG CTATTGAAAA TGGAGAATCT
CTTACATCAG AAGTTTTATG TAAGATGTGG AAAGATATAA ACATTAAATA TTTTGGTAAA
GATATGAATG TAGATGAAGA AATATCTATA GAATGGGCTA GAATACCTCA TTTTTATTCT
GATTTCTATG TATATCAATA TGCTACAGGC TATGCAGCTG CATCTTCCTT TGCAAATTCA
ATTCTTTCAA AAGGAGAAGA GGCTGTTGAA AAATACAAAG GTTTCTTAAA GGCTGGAGGA
TCAATGTATC CTATAGATAC ATTAAAAATG GCTGGAGTAG ATATGACAAC ATCTAAGCCT
CTTAAAGATA CCTTAGATAG ATTTAATGAG CTTTTAGATA TGTTGGAAGA AATTATTTAG
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| Protein sequence | MSEVKKLRRR DEIPESDKWR IDKIYETPAK WNEELNKLKE EAPKLKDFEG KLGNKEDLKA
FLLLNEKLSR KLGKLYVYAH MRSHEDTSNP EMQSLVNKID PYSAEFSSYT AYFVPEILSL
KEGTIENFIN EDKDLKQYKI YFEMILNEKP HILSKEVESV LASVSDCLGA PESIYSMLTN
SDMTFGEIVD ESGRKVELTE GNYISFIKSK DRKVREAAFK LLFGTYKKYE NTLATSLTSS
IKNFVFESKT RKYNSSLEAS LKPNNIPVEV YYNALKTVDE NMDALHRYVR IKKKLLNLEE
IHMYDLYVPV IECKKEHLEY KDAISLVEEG LKPLGKEYLD IFNEGINEGW IDVYENKGKR
SGAYSWGSYD TMPYVLLNYN YELNDASTLA HEMGHSIHSY YTRKTQPYIY GDYSLFCAEV
ASTTNEILLI HHLIEKETDK NKKLYLINQE LEQIRTTVFR QLMFAEFELK THEAIENGES
LTSEVLCKMW KDINIKYFGK DMNVDEEISI EWARIPHFYS DFYVYQYATG YAAASSFANS
ILSKGEEAVE KYKGFLKAGG SMYPIDTLKM AGVDMTTSKP LKDTLDRFNE LLDMLEEII
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