Gene CPF_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1682 
Symbol 
ID4203151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1901843 
End bp1903330 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content24% 
IMG OID638082556 
Producthypothetical protein 
Protein accessionYP_696120 
Protein GI110799315 
COG category[S] Function unknown 
COG ID[COG2357] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.918456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG ATTTAGCCTA TAGTGCAAAT CTGCTTGATG ATTTTTTCTA CTCCCTACTA 
GAGAACTCTT GTGAAGGATT TTTTAATATA TCAACTAGAG TAAAATCAGC TTCTAGTTTA
AAAGAGAAAA TAATAAGACA TAATTATTAC ATAAAATATG ATTCCCCTAC GGATTTATTT
AGAAACCTAT CTGATTTAAT AGGTGTCAGA ATAGAATGTA GATTTATAGA AGATGAGGAA
CATATATTTA AATTTATAAG AACAATATTT AATTGCACTA ATAAAGATGG ATTTTCTTAC
TCATCACAAA ATCCAAATAT ATTTTTAGAC CTTAGAGAAC ATCAACCCTT AAAACAAAAA
AATGGTTTTG AATTATATAG AATAGATGGA TTTATTCTAA ATGAAGAAGA AAAGTTTAAT
TTTGAACTTC AAATAAAATC TATGGTAAAT AATTTTTGGG GTGAAATTGA ACATAAGATC
ATATATAAAA ACTATAATAT GATTTTAGGG GATAAATTTT ATAAGAATAT ACTTAATTCT
ATTAAAAACA ATTTATGTTT AATAGATAAT CAACTTCTAA CTATATTTAA CCATGTTAAT
TCTCATATGG ATAATTCTAA TGGGGTTGGA TTAAAGAAGG AAGGTATTGA AATTTTACTT
TCTAAAATGA TATATGATAT ATACTCTTCT AAAGTAAAAC ATGATTTAGG TATATCTGTT
GATTTTAGAA ATGCCTGTGA CATAATAATA GATTACATAT TTACTAAAAA TAATTGTAAT
ACTTCTCAAG AATATTATAA TACTTTTGTA AATACTTCTG TAAGATTAAA CGAAGTTTTT
AAGGATTCCA TATCTTTTAA AAACAAATTA TCTATAGGTG CTGAGCCCTT ATGTTTTGAC
TCAGAATTTT CTAATTCAAT TGGAAATAAA CTAGCCCATG CTATGAATTA TGATTTTCAT
TGGAACTTGT TCTTTAAAAT ATTATTTCAA ATAGAACCTG GTAACAATAG AGAAGATTTT
TATTCCTTTA TAAGATACTT AGAGACTATT TTTTCTAATA GAGATTCCTA TTTAAATCTT
TATTTAACTT TTTCAGCTGA AGAGGTATCA ATAATAAAAG AAGATATTTT ATCTTCTTTA
AATAAGGCAT TCTTAGAAAT TGACTCTATA AAATTTATTT ATAGAGATAA ACTTTCTGAA
ATATTTAATC ATATAGATGA TTATGTTAAA TTCCTATGTG AAGGCATAGA TTCTTATGAA
AATTATGTAA GTCATAAACA TCTTTACACA GAGTATCTTT ATCTTACTAT ATTAAGTTCC
TTTAATATGG ATTTAGATAA GAGTTCCATA TTAGAGTTTG CTAGTGAGCT TAAAAATAGC
AAATGTAAAC TTAGAATAAG CTATAAGGGA ATAAAGCTAT TAGCCTCTAC CCCTGAAAAT
TGTAAAGTCA ACATAATTGA ACTTTTAGAA CAAATATATA TAAGGTAA
 
Protein sequence
MKKDLAYSAN LLDDFFYSLL ENSCEGFFNI STRVKSASSL KEKIIRHNYY IKYDSPTDLF 
RNLSDLIGVR IECRFIEDEE HIFKFIRTIF NCTNKDGFSY SSQNPNIFLD LREHQPLKQK
NGFELYRIDG FILNEEEKFN FELQIKSMVN NFWGEIEHKI IYKNYNMILG DKFYKNILNS
IKNNLCLIDN QLLTIFNHVN SHMDNSNGVG LKKEGIEILL SKMIYDIYSS KVKHDLGISV
DFRNACDIII DYIFTKNNCN TSQEYYNTFV NTSVRLNEVF KDSISFKNKL SIGAEPLCFD
SEFSNSIGNK LAHAMNYDFH WNLFFKILFQ IEPGNNREDF YSFIRYLETI FSNRDSYLNL
YLTFSAEEVS IIKEDILSSL NKAFLEIDSI KFIYRDKLSE IFNHIDDYVK FLCEGIDSYE
NYVSHKHLYT EYLYLTILSS FNMDLDKSSI LEFASELKNS KCKLRISYKG IKLLASTPEN
CKVNIIELLE QIYIR