| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1670 |
|---|
| Symbol | |
|---|
| ID | 4203343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 1888964 |
|---|
| End bp | 1889803 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 638082544 |
|---|
| Product | homocysteine S-methyltransferase family protein |
|---|
| Protein accession | YP_696108 |
|---|
| Protein GI | 110800954 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATT TAGATTTGAA AAATGGAGTA ATAATAGCAG ATGGAGCTAT GGGAACTAGA
ATAATGGAAT TAGGAGTAAA TTTAAAAGAT ACTCCATCAG AACTTTTAAA TATTAAAAAG
CCTGAATTAA TAGAAAAAAT TCATAGAGAG TATATAGAAT CTGGAGCTAA CTTAATACTT
TCAAATACAT TTATGTGTAA TATTATAAAT GCAAAAAGGA ATAATTATAA TTTAGAGGAA
GTTGTGGGGG CAGGAATTCA TATTGCTAAA AAAGCATGTG GAGATGGAGG TTTAGTTGCT
TTAGATATAG GACCTCTTTC ATATTATATA GAAGAAAATG ATTCTTCTTT TAAAGAAATT
GTTTATGAAA ATACTGAAAG AATAATTAAT GCTTCAAAAG ATAAATTTGA TTTAGTTATT
TTTGAAACCT TAGGAAGTTT AAAGGAAGGG GAATTTGCAG TTAAAAAAGC AAAAACTTTA
ACAGATAAAA AGGTTATATG TTCTTTTACT TTAGCTTATA AAAAGGATAT TCCTAATTTC
ATAAAAAATA TGGTTTCAAC TTTAGAGCCT TTAGGAGTAG ATGCCTTAGG AATAAATTGT
ACAGGGTATG AAGAAATACT AATAGCCTTA GATATACTTA AGGAAAATAT AAATCTCCCT
ATAATGATAA AGGCTAATTT AGGAATACCA AAAAAAGTAG GGGAAGAGCT TGTATATGAT
AAGACTTTAG AAGAATTTAA AAATTTATCT AAAAGAGCCC TTGAAAAGGG AGTTAATATA
ATAGGAGGAT GTTGTGGAAC AACTCCAGAA TATATAAGAG CTATTTGTAA TTTGAAATAG
|
|---|
| Protein sequence | MKNLDLKNGV IIADGAMGTR IMELGVNLKD TPSELLNIKK PELIEKIHRE YIESGANLIL
SNTFMCNIIN AKRNNYNLEE VVGAGIHIAK KACGDGGLVA LDIGPLSYYI EENDSSFKEI
VYENTERIIN ASKDKFDLVI FETLGSLKEG EFAVKKAKTL TDKKVICSFT LAYKKDIPNF
IKNMVSTLEP LGVDALGINC TGYEEILIAL DILKENINLP IMIKANLGIP KKVGEELVYD
KTLEEFKNLS KRALEKGVNI IGGCCGTTPE YIRAICNLK
|
|---|
| |